PK24260.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK24260.1 T290472_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK24260.1 Myb 15 62
PK24260.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.848
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.848
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.843
TCM_007865 Theobroma cacao TCM_007865 I 0.839
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.827
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.824
MDP0000155426 Malus domestica MDP0000155426 I 0.821
MDP0000407613 Malus domestica MDP0000407613 N 0.821
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.818
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.817
Pm015302 Prunus mume Pm015302 N 0.817
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.794
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.794
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.784
Ca_22597 Cicer arietinum Ca_22597 N 0.782
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.779
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.774
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.768
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.765
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.765
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.763
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.763
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.758
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.755
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.754
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.753
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.744
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.742
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.740
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.739
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.733
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.732
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.732
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.731
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.727
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.726
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.726
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.726
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.722
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.719
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.719
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.717
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.715
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.714
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.713
TCM_030020 Theobroma cacao TCM_030020 I 0.710
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.709
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.708
Lus10039772.g Linum usitatissimum Lus10039772.g N 0.708
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.707
MDP0000131822 Malus domestica MDP0000131822 I 0.704
GLYMA06G45570 Glycine max GLYMA06G45570 I 0.703
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.701
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.701
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.700
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.699
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.696
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.696
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.696
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.695
Lus10018545.g Linum usitatissimum Lus10018545.g N 0.695
Lus10039771.g Linum usitatissimum Lus10039771.g N 0.694
PK29337.1 Cannabis sativa PK29337.1 I 0.692
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.691
MDP0000289283 Malus domestica MDP0000289283 I 0.691
Lus10018546.g Linum usitatissimum Lus10018546.g N 0.690
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.687
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.687
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.686
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.684
TCM_026197 Theobroma cacao TCM_026197 I 0.683
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.679
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.679
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.678
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.678
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.677
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.676
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.675
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.675
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.675
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.675
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.675
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.674
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.674
Pm009880 Prunus mume Pm009880 N 0.672
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.671
29933.m001454 Ricinus communis 29933.m001454 N 0.671
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.669
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.669
OS10G0478300 Oryza sativa OS10G0478300 I 0.669
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.669
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.669
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.668
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.668
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.667
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.667
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.666
MYB14 Arabidopsis thaliana AT2G31180 I 0.666
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.666
GLYMA02G12242 Glycine max GLYMA02G12242 I 0.666
TCM_020889 Theobroma cacao TCM_020889 I 0.666
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.666
Bo8g105490 Brassica oleracea Bo8g105490 I 0.664
Bra026720 Brassica rapa Bra026720 I 0.664
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.664
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.664
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.664
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.664
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.664
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.663
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.663
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.662
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.662
TCM_007868 Theobroma cacao TCM_007868 I 0.662
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.662
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.662
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.662
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.661
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.661
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.661