TCM_007865 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_007865 T280457_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.661 0.667
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.661 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX99262 Myb 42 89
EOX99262 Myb 95 140

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.891
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.871
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.866
MDP0000155426 Malus domestica MDP0000155426 I 0.858
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.857
PK24260.1 Cannabis sativa PK24260.1 N 0.839
MDP0000407613 Malus domestica MDP0000407613 N 0.838
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.837
Pm015302 Prunus mume Pm015302 N 0.837
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.831
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.831
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.830
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.828
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.819
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.795
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.794
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.778
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.777
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.776
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.775
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.774
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.767
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.764
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.762
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.762
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.762
Ca_22597 Cicer arietinum Ca_22597 N 0.757
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.753
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.753
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.749
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.748
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.747
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.747
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.746
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.745
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.742
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.741
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.741
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.740
MDP0000131822 Malus domestica MDP0000131822 I 0.740
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.739
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.739
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.738
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.733
TCM_030020 Theobroma cacao TCM_030020 I 0.732
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.731
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.729
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.727
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.727
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.724
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.724
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.722
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.720
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.718
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.717
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.717
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.717
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.717
Lus10039772.g Linum usitatissimum Lus10039772.g N 0.716
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.715
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.715
MDP0000289283 Malus domestica MDP0000289283 I 0.714
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.714
Lus10039771.g Linum usitatissimum Lus10039771.g N 0.714
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.714
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.714
GLYMA06G45570 Glycine max GLYMA06G45570 I 0.714
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.714
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.712
Pm009880 Prunus mume Pm009880 N 0.710
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.706
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.706
Lus10018546.g Linum usitatissimum Lus10018546.g N 0.704
Lus10018545.g Linum usitatissimum Lus10018545.g N 0.702
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.702
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.701
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.700
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.699
TCM_026197 Theobroma cacao TCM_026197 I 0.699
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.698
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.696
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.696
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.696
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.696
OS10G0478300 Oryza sativa OS10G0478300 I 0.693
Cla006077 Citrullus lanatus Cla006077 I 0.693
PK20358.1 Cannabis sativa PK20358.1 I 0.693
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.693
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.693
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.693
TCM_033016 Theobroma cacao TCM_033016 N 0.693
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.693
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.692
29933.m001454 Ricinus communis 29933.m001454 N 0.691
PK29337.1 Cannabis sativa PK29337.1 I 0.690
PK08038.1 Cannabis sativa PK08038.1 I 0.689
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.688
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.687
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.687
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.687
TCM_020889 Theobroma cacao TCM_020889 I 0.687
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.687
MYB14 Arabidopsis thaliana AT2G31180 I 0.687
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.686
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.686
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.686
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.685
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.685
MDP0000145050 Malus domestica MDP0000145050 I 0.684
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.684
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.684
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.684
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.683
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.682
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.679
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.679
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.679
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.679
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.678
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.678
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.678
PK03488.1 Cannabis sativa PK03488.1 I 0.678
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.677
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.677
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.676
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.676
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.676
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.676
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.676
TCM_033015 Theobroma cacao TCM_033015 N 0.676
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.675
Bra015481 Brassica rapa Bra015481 I 0.673
Bo5g007320 Brassica oleracea Bo5g007320 I 0.673
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.671
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I 0.671
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.671
Bra026720 Brassica rapa Bra026720 I 0.670
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.670
Bo8g105490 Brassica oleracea Bo8g105490 I 0.670
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.670
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.670
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.670
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.669
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.669
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.669
Si010814m.g Setaria italica Si010814m.g I 0.669
MTR_1g043080 Medicago truncatula MTR_1g043080 I 0.668
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.668
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.667
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.667
TCM_007868 Theobroma cacao TCM_007868 I 0.667
TCM_004046 Theobroma cacao TCM_004046 I 0.667
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.667
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.667
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.666
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.666
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.665
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.665
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.665
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.665
GLYMA02G12242 Glycine max GLYMA02G12242 I 0.664
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.664
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.664
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.663
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.663
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.662
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.662
Si030273m.g Setaria italica Si030273m.g I 0.662
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.662
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.662
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.662
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.661
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.661
MYB58 Arabidopsis thaliana AT1G16490 D 0.661
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.661
Bra003619 Brassica rapa Bra003619 I 0.661
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I 0.661
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.661
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.661
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.661
Bo6g081140 Brassica oleracea Bo6g081140 I 0.661