VIT_12s0134g00480 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_12s0134g00480 T282021_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.681 0.699
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.681 0.699
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.670 0.720
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.670 0.720
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.664 0.710
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.664 0.710
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.663 0.742
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.662 0.753
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.662 0.753
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.662 0.753
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.662 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_12s0134g00480.t01 Myb 14 61
VIT_12s0134g00480.t01 Myb 67 112

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_007865 Theobroma cacao TCM_007865 I 0.866
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.855
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.831
MDP0000155426 Malus domestica MDP0000155426 I 0.830
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.824
PK24260.1 Cannabis sativa PK24260.1 N 0.818
MDP0000407613 Malus domestica MDP0000407613 N 0.810
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.809
Pm015302 Prunus mume Pm015302 N 0.809
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.807
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.807
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.804
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.801
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.800
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.781
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.776
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.775
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.772
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.762
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.758
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.755
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.754
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.753
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.751
MDP0000131822 Malus domestica MDP0000131822 I 0.750
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.744
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.744
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.740
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.740
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.738
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.737
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.733
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.732
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.731
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.730
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.727
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.726
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.724
Lus10039771.g Linum usitatissimum Lus10039771.g N 0.724
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.723
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.723
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.723
TCM_030020 Theobroma cacao TCM_030020 I 0.723
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.722
Ca_22597 Cicer arietinum Ca_22597 N 0.720
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.719
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.718
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.718
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.718
PK08038.1 Cannabis sativa PK08038.1 I 0.718
Pm009880 Prunus mume Pm009880 N 0.717
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.717
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.716
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.716
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.716
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.716
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.716
OS10G0478300 Oryza sativa OS10G0478300 I 0.716
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.716
MDP0000145050 Malus domestica MDP0000145050 I 0.716
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.716
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.715
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.715
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.715
Lus10018546.g Linum usitatissimum Lus10018546.g N 0.715
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.713
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.713
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.712
MDP0000289283 Malus domestica MDP0000289283 I 0.711
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.709
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.708
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.708
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.708
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.708
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.707
TCM_033016 Theobroma cacao TCM_033016 N 0.706
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.706
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.706
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.706
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.705
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.704
Cla006077 Citrullus lanatus Cla006077 I 0.704
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.702
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.702
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.700
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.700
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.700
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.700
Lus10039772.g Linum usitatissimum Lus10039772.g N 0.700
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.699
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.699
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.697
MYB14 Arabidopsis thaliana AT2G31180 I 0.697
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.697
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.697
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.697
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.697
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.696
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.696
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.696
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.695
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.695
PK20358.1 Cannabis sativa PK20358.1 I 0.695
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.694
TCM_026197 Theobroma cacao TCM_026197 I 0.694
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.694
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.692
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.692
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I 0.691
Si010814m.g Setaria italica Si010814m.g I 0.691
29933.m001454 Ricinus communis 29933.m001454 N 0.691
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.690
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.690
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.689
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.689
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.689
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.688
GLYMA06G45570 Glycine max GLYMA06G45570 I 0.687
TCM_004046 Theobroma cacao TCM_004046 I 0.687
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.687
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.687
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.687
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.687
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.687
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.687
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.687
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.685
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.685
TCM_007868 Theobroma cacao TCM_007868 I 0.685
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.683
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.682
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.682
MYB58 Arabidopsis thaliana AT1G16490 D 0.681
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.681
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.681
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.681
GLYMA03G41100 Glycine max GLYMA03G41100 I 0.680
TCM_033015 Theobroma cacao TCM_033015 N 0.679
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I 0.679
Lus10003557.g Linum usitatissimum Lus10003557.g I 0.679
Lus10033889.g Linum usitatissimum Lus10033889.g I 0.679
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I 0.679
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I 0.678
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.678
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.678
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.678
Lus10018545.g Linum usitatissimum Lus10018545.g N 0.678
PK29337.1 Cannabis sativa PK29337.1 I 0.678
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.676
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.676
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.676
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.676
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.676
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.675
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.675
Pm020596 Prunus mume Pm020596 I 0.675
OB04G25860 Oryza brachyantha OB04G25860 I 0.674
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.674
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.673
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.673
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.673
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.673
Bo8g105490 Brassica oleracea Bo8g105490 I 0.672
Bra026720 Brassica rapa Bra026720 I 0.672
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.672
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.672
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.672
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.672
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.672
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.670
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I 0.670
MTR_1g043080 Medicago truncatula MTR_1g043080 I 0.670
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.670
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.670
Cagra.1671s0249 Capsella grandiflora Cagra.1671s0249 I 0.670
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.670
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.670
29983.m003281 Ricinus communis 29983.m003281 I 0.669
cassava39892.m1 Manihot esculenta cassava39892.m1 I 0.669
Ciclev10017668m.g Citrus clementina Ciclev10017668m.g I 0.669
orange1.1g035629m.g Citrus sinensis orange1.1g035629m.g I 0.669
Bo4g176020 Brassica oleracea Bo4g176020 I 0.667
Bo4g176030 Brassica oleracea Bo4g176030 I 0.667
Bra018267 Brassica rapa Bra018267 I 0.667
Bra021708 Brassica rapa Bra021708 I 0.667
TCM_020889 Theobroma cacao TCM_020889 I 0.667
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.667
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.667
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.667
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.667
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.667
PK03488.1 Cannabis sativa PK03488.1 I 0.667
Bo5g007320 Brassica oleracea Bo5g007320 I 0.666
Bra015481 Brassica rapa Bra015481 I 0.666
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.666
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.666
Bo3g025100 Brassica oleracea Bo3g025100 I 0.665
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.665
OMERI10G10120 Oryza meridionalis OMERI10G10120 I 0.665
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I 0.665
Pm019588 Prunus mume Pm019588 I 0.665
Gorai.005G206300 Gossypium raimondii Gorai.005G206300 I 0.665
MYB39 Arabidopsis thaliana AT4G17785 D 0.664
Bo1g017860 Brassica oleracea Bo1g017860 I 0.664
Bra040181 Brassica rapa Bra040181 I 0.664
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.664
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.664
Si018182m.g Setaria italica Si018182m.g I 0.664
Bostr.30275s0243 Boechera stricta Bostr.30275s0243 I 0.664
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.664
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.664
Thhalv10026921m.g Eutrema salsugineum Thhalv10026921m.g I 0.664
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.663
Bo6g081140 Brassica oleracea Bo6g081140 I 0.663
Bra003619 Brassica rapa Bra003619 I 0.663
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.663
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.663
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.663
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.663
Si030273m.g Setaria italica Si030273m.g I 0.663
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.663
Cla007838 Citrullus lanatus Cla007838 I 0.663
Cucsa.148040 Cucumis sativus Cucsa.148040 I 0.663
mgf019381m Mimulus guttatus mgf019381m I 0.663
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.663
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.663
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.663
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.663
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.663
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.663
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.663
MYB15 Arabidopsis thaliana AT3G23250 D 0.662
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I 0.662
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.662
PDK_20s1427521g001 Phoenix dactylifera PDK_20s1427521g001 I 0.662
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.661
GLYMA02G12242 Glycine max GLYMA02G12242 I 0.661
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.661
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.661
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.661
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.661