PK29337.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK29337.1 T290498_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.679 0.731
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.679 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK29337.1 Myb 19 66
PK29337.1 Myb 72 117

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.764
Aquca_030_00245 Aquilegia coerulea Aquca_030_00245 N 0.755
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.751
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.751
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.742
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.740
mgf019234m Mimulus guttatus mgf019234m N 0.734
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.731
Pm015302 Prunus mume Pm015302 N 0.731
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.731
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.717
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.716
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.713
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.707
MDP0000155426 Malus domestica MDP0000155426 I 0.705
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.704
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.703
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.703
OS10G0478300 Oryza sativa OS10G0478300 I 0.703
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.702
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.702
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.702
MDP0000407613 Malus domestica MDP0000407613 N 0.702
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.701
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.701
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.701
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.700
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.700
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.700
Lus10033737.g Linum usitatissimum Lus10033737.g N 0.700
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.699
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.693
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.693
PK24260.1 Cannabis sativa PK24260.1 N 0.692
mgf022141m Mimulus guttatus mgf022141m N 0.691
TCM_007865 Theobroma cacao TCM_007865 I 0.690
cassava26895.m1 Manihot esculenta cassava26895.m1 N 0.690
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.688
mgf018684m Mimulus guttatus mgf018684m N 0.687
mgf022158m Mimulus guttatus mgf022158m N 0.687
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.686
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.683
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.682
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.682
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.682
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.682
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.682
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.681
TCM_007868 Theobroma cacao TCM_007868 I 0.680
PK03488.1 Cannabis sativa PK03488.1 I 0.680
MYB58 Arabidopsis thaliana AT1G16490 D 0.679
Bo6g081140 Brassica oleracea Bo6g081140 I 0.679
Bra003619 Brassica rapa Bra003619 I 0.679
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.679
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.679
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.679
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.679
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.679
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.678
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.677
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.677
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.676
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.675
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I 0.675
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.674
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.673
Lus10018518.g Linum usitatissimum Lus10018518.g N 0.673
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.672
MYB14 Arabidopsis thaliana AT2G31180 I 0.672
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.672
Bo4g176020 Brassica oleracea Bo4g176020 I 0.672
Bo4g176030 Brassica oleracea Bo4g176030 I 0.672
Bra018267 Brassica rapa Bra018267 I 0.672
Bra021708 Brassica rapa Bra021708 I 0.672
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.672
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.672
OB02G35920 Oryza brachyantha OB02G35920 I 0.672
OBART02G28790 Oryza barthii OBART02G28790 I 0.672
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.672
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.672
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.672
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.672
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.672
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.672
OS02G0695200 Oryza sativa OS02G0695200 I 0.672
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.672
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.672
Lus10041145.g Linum usitatissimum Lus10041145.g I 0.672
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.672
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I 0.671
Bo3g025100 Brassica oleracea Bo3g025100 I 0.670
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.670
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.670
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.670
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.669
F775_14744 Aegilops tauschii F775_14744 I 0.669
MLOC_71418 Hordeum vulgare MLOC_71418 I 0.669
TCM_020889 Theobroma cacao TCM_020889 I 0.669
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I 0.669
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I 0.669
TRIUR3_14330 Triticum urartu TRIUR3_14330 I 0.669
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.668
Bo6g122640 Brassica oleracea Bo6g122640 I 0.667
Si010814m.g Setaria italica Si010814m.g I 0.667
TCM_026197 Theobroma cacao TCM_026197 I 0.667
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.667
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.666
Si010384m.g Setaria italica Si010384m.g I 0.666
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.666
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.666
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.665
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.665
MTR_2g067420 Medicago truncatula MTR_2g067420 I 0.665
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.665
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.665
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.665
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.664
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.663
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.663
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.663
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.663
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.663
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.662
Bo8g105490 Brassica oleracea Bo8g105490 I 0.662
Bra026720 Brassica rapa Bra026720 I 0.662
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.662
OB04G30570 Oryza brachyantha OB04G30570 I 0.662
OBART04G23680 Oryza barthii OBART04G23680 I 0.662
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.662
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.662
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.662
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.662
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.662
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.662
OS04G0594100 Oryza sativa OS04G0594100 I 0.662
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.662
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.662
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.662
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.661
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.661
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.661
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.661
Pm015303 Prunus mume Pm015303 I 0.661
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.661