TCM_007868 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_007868 T280458_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.668 0.699
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.668 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX99263 Myb 14 61
EOX99263 Myb 67 112

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.818
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.818
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.811
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.766
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.761
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.759
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I 0.750
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.744
PGSC0003DMG400046667 Solanum tuberosum PGSC0003DMG400046667 N 0.740
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.730
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.727
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.727
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.725
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.725
mgf019234m Mimulus guttatus mgf019234m N 0.724
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.723
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.723
PGSC0003DMG400047175 Solanum tuberosum PGSC0003DMG400047175 N 0.721
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.719
MDP0000148689 Malus domestica MDP0000148689 N 0.711
GRMZM2G147346 Zea mays GRMZM2G147346 I 0.711
mgf022141m Mimulus guttatus mgf022141m N 0.710
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.708
OS10G0478300 Oryza sativa OS10G0478300 I 0.706
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.706
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.706
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I 0.705
Sb01g019270 Sorghum bicolor Sb01g019270 I 0.705
Si040527m.g Setaria italica Si040527m.g I 0.705
Pavir.J09313 Panicum virgatum Pavir.J09313 I 0.705
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I 0.702
Pm015303 Prunus mume Pm015303 I 0.702
Lus10033737.g Linum usitatissimum Lus10033737.g N 0.702
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.699
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.698
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I 0.698
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.698
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.698
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.698
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.698
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.697
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.697
Solyc07g054960.1 Solanum lycopersicum Solyc07g054960.1 I 0.695
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.695
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.694
Lus10018518.g Linum usitatissimum Lus10018518.g N 0.693
Gorai.013G073000 Gossypium raimondii Gorai.013G073000 N 0.693
cassava26895.m1 Manihot esculenta cassava26895.m1 N 0.692
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.692
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.689
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.689
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.688
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.688
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.687
Aquca_030_00245 Aquilegia coerulea Aquca_030_00245 N 0.687
MDP0000897594 Malus domestica MDP0000897594 I 0.686
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.685
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.685
SapurV1A.0151s0280 Salix purpurea SapurV1A.0151s0280 I 0.683
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.683
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.682
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.681
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.681
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.681
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.680
PK29337.1 Cannabis sativa PK29337.1 I 0.680
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.680
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.680
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.679
Ca_22597 Cicer arietinum Ca_22597 N 0.679
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.678
GSMUA_Achr1G09180_001 Musa acuminata GSMUA_Achr1G09180_001 I 0.677
TCM_026197 Theobroma cacao TCM_026197 I 0.677
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.677
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.677
MDP0000155426 Malus domestica MDP0000155426 I 0.676
MDP0000407613 Malus domestica MDP0000407613 N 0.676
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.676
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.675
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.674
29933.m001454 Ricinus communis 29933.m001454 N 0.673
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.673
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.672
Pm015302 Prunus mume Pm015302 N 0.672
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.672
BGIOSGA006005 Oryza indica BGIOSGA006005 I 0.671
MYB30 Oryza sativa OS02G0624300 I 0.671
OB02G31990 Oryza brachyantha OB02G31990 I 0.671
ORGLA02G0213400 Oryza glaberrima ORGLA02G0213400 I 0.671
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.671
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.671
ORUFI02G25970 Oryza rufipogon ORUFI02G25970 I 0.671
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.670
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.670
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.670
mgf018684m Mimulus guttatus mgf018684m N 0.670
mgf022158m Mimulus guttatus mgf022158m N 0.670
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.670
Si010814m.g Setaria italica Si010814m.g I 0.669
MDP0000131822 Malus domestica MDP0000131822 I 0.669
Cla006077 Citrullus lanatus Cla006077 I 0.669
MDP0000145050 Malus domestica MDP0000145050 I 0.669
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.669
Pm020596 Prunus mume Pm020596 I 0.669
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.669
OB04G25860 Oryza brachyantha OB04G25860 I 0.669
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.669
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.669
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.668
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.668
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.668
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I 0.668
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.668
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.668
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.668
SapurV1A.0417s0140 Salix purpurea SapurV1A.0417s0140 N 0.667
SapurV1A.0555s0160 Salix purpurea SapurV1A.0555s0160 I 0.667
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.667
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.667
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.667
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.667
POPTR_0001s02240 Populus trichocarpa POPTR_0001s02240 I 0.667
TCM_007865 Theobroma cacao TCM_007865 I 0.667
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.667
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.665
ONIVA04G17140 Oryza nivara ONIVA04G17140 I 0.665
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.665
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.664
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.664
GRMZM2G127857 Zea mays GRMZM2G127857 I 0.664
POPTR_0003s09300 Populus trichocarpa POPTR_0003s09300 I 0.663
mgf011672m Mimulus guttatus mgf011672m I 0.663
TCM_030020 Theobroma cacao TCM_030020 I 0.663
Gorai.004G183500 Gossypium raimondii Gorai.004G183500 I 0.662
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.662
Gorai.004G183600 Gossypium raimondii Gorai.004G183600 I 0.662
PK24260.1 Cannabis sativa PK24260.1 N 0.662
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.661
POPTR_0019s14130 Populus trichocarpa POPTR_0019s14130 N 0.661
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.661
GLYMA03G41100 Glycine max GLYMA03G41100 I 0.661