PGSC0003DMG401026177 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG401026177 T277769_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.672 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400067321 Myb 14 61
PGSC0003DMT400067321 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.901
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.898
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.891
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.855
Solyc07g055000.1 Solanum lycopersicum Solyc07g055000.1 N 0.816
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.809
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.801
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.783
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.769
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.765
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.759
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.748
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.740
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.738
TCM_007865 Theobroma cacao TCM_007865 I 0.738
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.735
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.735
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.732
Pm015302 Prunus mume Pm015302 N 0.732
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.728
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.726
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.723
MDP0000155426 Malus domestica MDP0000155426 I 0.723
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.721
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.721
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.718
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.714
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.714
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.712
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.712
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.710
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.707
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.706
MDP0000407613 Malus domestica MDP0000407613 N 0.706
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.704
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.703
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.701
PK24260.1 Cannabis sativa PK24260.1 N 0.701
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.699
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.699
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.699
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.697
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.697
Bo9g076410 Brassica oleracea Bo9g076410 I 0.696
Bra029553 Brassica rapa Bra029553 I 0.696
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.696
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.696
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.696
PK20358.1 Cannabis sativa PK20358.1 I 0.694
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.689
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.689
cassava14699.m1 Manihot esculenta cassava14699.m1 I 0.688
MDP0000131822 Malus domestica MDP0000131822 I 0.687
GSMUA_Achr6G31520_001 Musa acuminata GSMUA_Achr6G31520_001 I 0.686
29933.m001454 Ricinus communis 29933.m001454 N 0.686
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.686
Bo1g017860 Brassica oleracea Bo1g017860 I 0.683
Bra021033 Brassica rapa Bra021033 I 0.683
Bra040181 Brassica rapa Bra040181 I 0.683
Cla013211 Citrullus lanatus Cla013211 I 0.683
Cucsa.318610 Cucumis sativus Cucsa.318610 I 0.683
Thhalv10026921m.g Eutrema salsugineum Thhalv10026921m.g I 0.683
Pm009880 Prunus mume Pm009880 N 0.682
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.682
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.682
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.681
GLYMA02G00820 Glycine max GLYMA02G00820 I 0.680
GLYMA10G00930 Glycine max GLYMA10G00930 I 0.680
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.680
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.679
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.678
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.678
MTR_0063s0090 Medicago truncatula MTR_0063s0090 N 0.678
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.678
Si030273m.g Setaria italica Si030273m.g I 0.678
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.678
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.678
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.677
TCM_030020 Theobroma cacao TCM_030020 I 0.677
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.677
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.676
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.675
Solyc08g076710.2 Solanum lycopersicum Solyc08g076710.2 I 0.675
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I 0.674
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.673
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.673
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.673
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.673
GSMUA_AchrUn_randomG07900_001 Musa acuminata GSMUA_AchrUn_randomG07900_001 I 0.673
OB04G30570 Oryza brachyantha OB04G30570 I 0.673
OBART04G23680 Oryza barthii OBART04G23680 I 0.673
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.673
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.673
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.673
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.673
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.673
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.673
OS04G0594100 Oryza sativa OS04G0594100 I 0.673
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.673
Si010384m.g Setaria italica Si010384m.g I 0.673
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.673
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.673
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I 0.673
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.672
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.672
Bo6g081140 Brassica oleracea Bo6g081140 I 0.672
Bo6g122640 Brassica oleracea Bo6g122640 I 0.672
Bra003619 Brassica rapa Bra003619 I 0.672
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.672
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.672
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.672
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.672
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.672
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.672
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.672
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.672
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.672
TCM_030009 Theobroma cacao TCM_030009 I 0.672
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.672
Cla001360 Citrullus lanatus Cla001360 I 0.672
Cla019747 Citrullus lanatus Cla019747 I 0.672
Pm009892 Prunus mume Pm009892 I 0.672
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I 0.672
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.672
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.672
mgf018114m Mimulus guttatus mgf018114m I 0.672
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.672
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.672
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.672
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.672
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.672
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.672
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.672
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.672
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.672
MDP0000492221 Malus domestica MDP0000492221 I 0.672
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.672
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.672
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.671
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.671
Ca_22597 Cicer arietinum Ca_22597 N 0.671
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.671
PDK_20s1427521g001 Phoenix dactylifera PDK_20s1427521g001 I 0.671
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.669
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.669
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.669
30169.m006322 Ricinus communis 30169.m006322 I 0.669
PGSC0003DMG400042926 Solanum tuberosum PGSC0003DMG400042926 N 0.668
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.668
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N 0.668
Ca_11494 Cicer arietinum Ca_11494 I 0.668
evm.TU.supercontig_27.135 Carica papaya evm.TU.supercontig_27.135 I 0.668
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.668
LjSGA_022617.1 Lotus japonicus LjSGA_022617.1 I 0.668
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.667
POPTR_0019s14130 Populus trichocarpa POPTR_0019s14130 N 0.667
Gorai.002G106300 Gossypium raimondii Gorai.002G106300 I 0.667
GLYMA08G17861 Glycine max GLYMA08G17861 I 0.666
GLYMA15G41255 Glycine max GLYMA15G41255 I 0.666
GSMUA_Achr1G23990_001 Musa acuminata GSMUA_Achr1G23990_001 I 0.666
TCM_020889 Theobroma cacao TCM_020889 I 0.666
MDP0000215675 Malus domestica MDP0000215675 I 0.666
Solyc03g093890.2 Solanum lycopersicum Solyc03g093890.2 N 0.665
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.665
Bo3g081700 Brassica oleracea Bo3g081700 I 0.664
Bo7g040780 Brassica oleracea Bo7g040780 I 0.664
Bra001907 Brassica rapa Bra001907 I 0.664
Bra014929 Brassica rapa Bra014929 I 0.664
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I 0.664
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.664
GSMUA_Achr10G24560_001 Musa acuminata GSMUA_Achr10G24560_001 I 0.664
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.664
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.664
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.664
Si010814m.g Setaria italica Si010814m.g I 0.664
Cla006077 Citrullus lanatus Cla006077 I 0.664
Bostr.10689s0089 Boechera stricta Bostr.10689s0089 I 0.664
Bostr.19424s0318 Boechera stricta Bostr.19424s0318 I 0.664
Cagra.2181s0015 Capsella grandiflora Cagra.2181s0015 I 0.664
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.664
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.664
Thhalv10022110m.g Eutrema salsugineum Thhalv10022110m.g I 0.664
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.663
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.663
Bo8g049720 Brassica oleracea Bo8g049720 I 0.662
GRMZM5G833253 Zea mays GRMZM5G833253 I 0.662
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.662
OB02G35920 Oryza brachyantha OB02G35920 I 0.662
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.662
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.662
Si017704m.g Setaria italica Si017704m.g I 0.662
Solyc08g076700.1 Solanum lycopersicum Solyc08g076700.1 I 0.662
gene29961-v1.0-hybrid Fragaria vesca gene29961-v1.0-hybrid I 0.662
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.662
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.662
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.662
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I 0.662
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I 0.662
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.661