orange1.1g045032m.g (Citrus sinensis)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 orange1.1g045032m.g T356668_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.850 0.741
WRKY30
M02563_2.00 		Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY		 PBM
Weirauch et al.(2014)
pTH7611 		0.849 0.741
WRKY30
M07422_2.00 		Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH		 Dap-seq
OMalley et al.(2016)
WRKY30_col_a 		0.849 0.741
WRKY30
M07423_2.00 		Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN		 Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a 		0.849 0.741
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.817 0.603
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.814 0.638
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.814 0.638
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.813 0.621
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g045032m WRKY 110 169

Links

Other WRKY family TFs
Other Citrus sinensis TFs

480 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29917.m001977 Ricinus communis 29917.m001977 I
30147.m013937 Ricinus communis 30147.m013937 I
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I
Bo2g144970 Brassica oleracea Bo2g144970 I
Bostr.0556s0457 Boechera stricta Bostr.0556s0457 I
Bra025299 Brassica rapa Bra025299 I
Bra033027 Brassica rapa Bra033027 I
Cagra.11216s0002 Capsella grandiflora Cagra.11216s0002 I
Carubv10018693m.g Capsella rubella Carubv10018693m.g I
cassava19706.m1 Manihot esculenta cassava19706.m1 I
cassava33974.m1 Manihot esculenta cassava33974.m1 I
cassava9008.m1 Manihot esculenta cassava9008.m1 I
Ca_17294 Cicer arietinum Ca_17294 I
Ciclev10017526m.g Citrus clementina Ciclev10017526m.g I
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I
Cla010586 Citrullus lanatus Cla010586 I
Cla019490 Citrullus lanatus Cla019490 I
Cucsa.196850 Cucumis sativus Cucsa.196850 I
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I
evm.TU.supercontig_108.29 Carica papaya evm.TU.supercontig_108.29 I
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I
GLYMA05G02300 Glycine max GLYMA05G02300 I
GLYMA16G07927 Glycine max GLYMA16G07927 I
GLYMA19G13923 Glycine max GLYMA19G13923 I
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I
GRMZM5G870592 Zea mays GRMZM5G870592 I
Lus10002384.g Linum usitatissimum Lus10002384.g I
Lus10005864.g Linum usitatissimum Lus10005864.g I
Lus10042111.g Linum usitatissimum Lus10042111.g I
MDP0000199939 Malus domestica MDP0000199939 I
MDP0000215359 Malus domestica MDP0000215359 I
MDP0000319656 Malus domestica MDP0000319656 I
MTR_5g049190 Medicago truncatula MTR_5g049190 I
MYB118 Arabidopsis thaliana AT3G27785 D
MYB118 Arabidopsis lyrata fgenesh2_kg.5__560__AT3G27785.1 I
MYB118 Populus trichocarpa POPTR_0001s35140 I
MYB98 Vitis vinifera VIT_17s0000g08550 I
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I
Pavir.J02497 Panicum virgatum Pavir.J02497 I
Pavir.J02718 Panicum virgatum Pavir.J02718 I
Pm000541 Prunus mume Pm000541 I
Pm015681 Prunus mume Pm015681 I
Pm024743 Prunus mume Pm024743 I
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I
PRUPE_ppa019507mg Prunus persica PRUPE_ppa019507mg I
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I
Sb01g005100 Sorghum bicolor Sb01g005100 I
TCM_012087 Theobroma cacao TCM_012087 I
TCM_016909 Theobroma cacao TCM_016909 I
Thhalv10005564m.g Eutrema salsugineum Thhalv10005564m.g I
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I
VIT_14s0066g01010 Vitis vinifera VIT_14s0066g01010 I