CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
M408DRAFT_21352
(
Serendipita vermifera
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
M408DRAFT_21352
T372552_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIM31292
Zinc cluster
26
66
QGCWTCRFRRKKCDEQQAGTGLCGNCSRLRIDCLGWGERRP
Links
Other
Zinc cluster
family TFs
Other
Serendipita vermifera
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29417.m000034
Ricinus communis
29417.m000034
N
0.000
30174.m008836
Ricinus communis
30174.m008836
N
0.000
AMTR_s00059p00116150
Amborella trichopoda
AMTR_s00059p00116150
N
0.000
Aquca_013_00703
Aquilegia coerulea
Aquca_013_00703
N
0.000
BGIOSGA007635
Oryza indica
BGIOSGA007635
N
0.000
BGIOSGA023427
Oryza indica
BGIOSGA023427
N
0.000
BRADI1G32050
Brachypodium distachyon
BRADI1G32050
N
0.000
BRADI3G05380
Brachypodium distachyon
BRADI3G05380
N
0.000
cassava14439.m1
Manihot esculenta
cassava14439.m1
N
0.000
cassava446.valid.m1
Manihot esculenta
cassava446.valid.m1
N
0.000
Ca_06740
Cicer arietinum
Ca_06740
N
0.000
Ciclev10016385m.g
Citrus clementina
Ciclev10016385m.g
N
0.000
Ciclev10021750m.g
Citrus clementina
Ciclev10021750m.g
N
0.000
Cla006768
Citrullus lanatus
Cla006768
N
0.000
Cucsa.120560
Cucumis sativus
Cucsa.120560
N
0.000
Eucgr.E00457
Eucalyptus grandis
Eucgr.E00457
N
0.000
Eucgr.E01501
Eucalyptus grandis
Eucgr.E01501
N
0.000
evm.TU.supercontig_145.1
Carica papaya
evm.TU.supercontig_145.1
N
0.000
evm.TU.supercontig_29.132
Carica papaya
evm.TU.supercontig_29.132
N
0.000
GLYMA01G17580
Glycine max
GLYMA01G17580
N
0.000
GLYMA11G17770
Glycine max
GLYMA11G17770
N
0.000
GLYMA13G23360
Glycine max
GLYMA13G23360
N
0.000
GLYMA17G11470
Glycine max
GLYMA17G11470
N
0.000
Gorai.001G174900
Gossypium raimondii
Gorai.001G174900
N
0.000
Gorai.003G169800
Gossypium raimondii
Gorai.003G169800
N
0.000
Gorai.004G110400
Gossypium raimondii
Gorai.004G110400
N
0.000
Gorai.004G163500
Gossypium raimondii
Gorai.004G163500
N
0.000
Gorai.007G089600
Gossypium raimondii
Gorai.007G089600
N
0.000
Gorai.008G237000
Gossypium raimondii
Gorai.008G237000
N
0.000
GRMZM2G017882
Zea mays
GRMZM2G017882
N
0.000
GSMUA_Achr11G04210_001
Musa acuminata
GSMUA_Achr11G04210_001
N
0.000
GSMUA_Achr2G02580_001
Musa acuminata
GSMUA_Achr2G02580_001
N
0.000
GSMUA_Achr7G03600_001
Musa acuminata
GSMUA_Achr7G03600_001
N
0.000
GSMUA_Achr8G33510_001
Musa acuminata
GSMUA_Achr8G33510_001
N
0.000
GSMUA_Achr9G22490_001
Musa acuminata
GSMUA_Achr9G22490_001
N
0.000
GSMUA_Achr9G30790_001
Musa acuminata
GSMUA_Achr9G30790_001
N
0.000
GSMUA_AchrUn_randomG23740_001
Musa acuminata
GSMUA_AchrUn_randomG23740_001
N
0.000
LjSGA_033751.1
Lotus japonicus
LjSGA_033751.1
N
0.000
LPERR02G04770
Leersia perrieri
LPERR02G04770
N
0.000
LPERR06G19930
Leersia perrieri
LPERR06G19930
N
0.000
Lus10009283.g
Linum usitatissimum
Lus10009283.g
N
0.000
Lus10015881.g
Linum usitatissimum
Lus10015881.g
N
0.000
MLOC_21744
Hordeum vulgare
MLOC_21744
N
0.000
OB02G14750
Oryza brachyantha
OB02G14750
N
0.000
OBART02G05520
Oryza barthii
OBART02G05520
N
0.000
OBART06G24000
Oryza barthii
OBART06G24000
N
0.000
OGLUM02G05380
Oryza glumaepatula
OGLUM02G05380
N
0.000
OGLUM06G25260
Oryza glumaepatula
OGLUM06G25260
N
0.000
OLONG_011712
Oryza longistaminata
OLONG_011712
N
0.000
OLONG_022199
Oryza longistaminata
OLONG_022199
N
0.000
OMERI06G23930
Oryza meridionalis
OMERI06G23930
N
0.000
ONIVA02G05860
Oryza nivara
ONIVA02G05860
N
0.000
ONIVA03G43780
Oryza nivara
ONIVA03G43780
N
0.000
OPUNC02G04680
Oryza punctata
OPUNC02G04680
N
0.000
OPUNC06G21750
Oryza punctata
OPUNC06G21750
N
0.000
orange1.1g035685m.g
Citrus sinensis
orange1.1g035685m.g
N
0.000
orange1.1g048158m.g
Citrus sinensis
orange1.1g048158m.g
N
0.000
ORGLA06G0201700
Oryza glaberrima
ORGLA06G0201700
N
0.000
ORUFI02G05620
Oryza rufipogon
ORUFI02G05620
N
0.000
OS02G0172800
Oryza sativa
OS02G0172800
N
0.000
OS06G0666100
Oryza sativa
OS06G0666100
N
0.000
Pavir.Aa03378
Panicum virgatum
Pavir.Aa03378
N
0.000
Pavir.Ab00578
Panicum virgatum
Pavir.Ab00578
N
0.000
Pavir.Da00255
Panicum virgatum
Pavir.Da00255
N
0.000
Pavir.Db00476
Panicum virgatum
Pavir.Db00476
N
0.000
PDK_20s1530701g001
Phoenix dactylifera
PDK_20s1530701g001
N
0.000
PK01122.1
Cannabis sativa
PK01122.1
N
0.000
PK04104.1
Cannabis sativa
PK04104.1
N
0.000
PK22765.1
Cannabis sativa
PK22765.1
N
0.000
Pm017841
Prunus mume
Pm017841
N
0.000
POPTR_0001s15920
Populus trichocarpa
POPTR_0001s15920
N
0.000
POPTR_0002s14570
Populus trichocarpa
POPTR_0002s14570
N
0.000
POPTR_0003s07310
Populus trichocarpa
POPTR_0003s07310
N
0.000
POPTR_0014s05840
Populus trichocarpa
POPTR_0014s05840
N
0.000
PRUPE_ppa023785mg
Prunus persica
PRUPE_ppa023785mg
N
0.000
SapurV1A.0033s0510
Salix purpurea
SapurV1A.0033s0510
N
0.000
SapurV1A.0104s0310
Salix purpurea
SapurV1A.0104s0310
N
0.000
SapurV1A.0210s0200
Salix purpurea
SapurV1A.0210s0200
N
0.000
SapurV1A.0382s0270
Salix purpurea
SapurV1A.0382s0270
N
0.000
Sb04g004830
Sorghum bicolor
Sb04g004830
N
0.000
Sb10g026620
Sorghum bicolor
Sb10g026620
N
0.000
Si007394m.g
Setaria italica
Si007394m.g
N
0.000
Si018139m.g
Setaria italica
Si018139m.g
N
0.000
Solyc01g091000.2
Solanum lycopersicum
Solyc01g091000.2
N
0.000
TCM_005554
Theobroma cacao
TCM_005554
N
0.000
TCM_016018
Theobroma cacao
TCM_016018
N
0.000
Traes_6BS_4DA724E79
Triticum aestivum
Traes_6BS_4DA724E79
N
0.000
Traes_6DS_CA4C01DEF
Triticum aestivum
Traes_6DS_CA4C01DEF
N
0.000
Traes_7AL_5E9E6A334
Triticum aestivum
Traes_7AL_5E9E6A334
N
0.000
Traes_7DL_B446D4CC6
Triticum aestivum
Traes_7DL_B446D4CC6
N
0.000
TRIUR3_33737
Triticum urartu
TRIUR3_33737
N
0.000
VIT_00s0233g00100
Vitis vinifera
VIT_00s0233g00100
N
0.000
VIT_02s0154g00150
Vitis vinifera
VIT_02s0154g00150
N
0.000
VIT_15s0048g00580
Vitis vinifera
VIT_15s0048g00580
N
0.000