SKUD_205412 (Saccharomyces kudriavzevii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SKUD_205412 T383902_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STB4
M00100_2.00 		Saccharomyces cerevisiae
NWCGGRWNNN
NNNWYCCGWN		 PBM
Badis et al.(2008)
STB4_2129 		0.658 0.921
STB4
M00927_2.00 		Saccharomyces cerevisiae
NTTCSGAKMN
NKMTCSGAAN		 PBM
Gordan et al.(2011)
Stb4 		0.658 0.921
STB4
M07527_2.00 		Saccharomyces cerevisiae
YTCGGAA
TTCCGAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0391.1 		0.658 0.921
STB4
M08686_2.00 		Saccharomyces cerevisiae
YTCGGAA
TTCCGAR		 Misc
DeBoer et al.(2011)
YMR019W_483 		0.658 0.921
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT43719 Zinc cluster 44 82

Links

Other Zinc cluster family TFs
Other Saccharomyces kudriavzevii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29838.m001690 Ricinus communis 29838.m001690 I
AGL15 Arabidopsis thaliana AT5G13790 D
AGL18 Vitis vinifera VIT_08s0007g08790 I
AGL24 Arabidopsis thaliana AT4G24540 I
AGL24 Arabidopsis lyrata fgenesh2_kg.7__1822__AT4G24540.1 I
AGL24 Vitis vinifera VIT_18s0001g07460 I
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I
Aquca_015_00177 Aquilegia coerulea Aquca_015_00177 I
BGIOSGA011317 Oryza indica BGIOSGA011317 I
Bo1g039080 Brassica oleracea Bo1g039080 I
Bo4g149800 Brassica oleracea Bo4g149800 I
Bo4g195720 Brassica oleracea Bo4g195720 I
Bo7g109590 Brassica oleracea Bo7g109590 I
Bo8g101000 Brassica oleracea Bo8g101000 I
Bostr.19427s0024 Boechera stricta Bostr.19427s0024 I
Bostr.7867s0261 Boechera stricta Bostr.7867s0261 I
Bra013812 Brassica rapa Bra013812 I
Bra019221 Brassica rapa Bra019221 I
Bra030228 Brassica rapa Bra030228 I
Bra038511 Brassica rapa Bra038511 I
Cagra.1080s0011 Capsella grandiflora Cagra.1080s0011 I
Cagra.2171s0007 Capsella grandiflora Cagra.2171s0007 I
Carubv10005653m.g Capsella rubella Carubv10005653m.g I
Carubv10023941m.g Capsella rubella Carubv10023941m.g I
cassava1567.valid.m1 Manihot esculenta cassava1567.valid.m1 I
cassava26340.m1 Manihot esculenta cassava26340.m1 I
cassava3099.m1 Manihot esculenta cassava3099.m1 I
cassava31070.valid.m1 Manihot esculenta cassava31070.valid.m1 I
cassava31071.valid.m1 Manihot esculenta cassava31071.valid.m1 I
cassava42879.valid.m1 Manihot esculenta cassava42879.valid.m1 I
Ca_19854 Cicer arietinum Ca_19854 I
Ca_21060 Cicer arietinum Ca_21060 I
chr4.CM0126.630.nc Lotus japonicus chr4.CM0126.630.nc I
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I
Ciclev10026457m.g Citrus clementina Ciclev10026457m.g I
Cla002388 Citrullus lanatus Cla002388 I
Cla014322 Citrullus lanatus Cla014322 I
Cla022499 Citrullus lanatus Cla022499 I
Cucsa.104010 Cucumis sativus Cucsa.104010 I
Cucsa.115490 Cucumis sativus Cucsa.115490 I
Cucsa.160640 Cucumis sativus Cucsa.160640 I
Cucsa.331900 Cucumis sativus Cucsa.331900 I
Eucgr.E00516 Eucalyptus grandis Eucgr.E00516 I
Eucgr.F00420 Eucalyptus grandis Eucgr.F00420 I
Eucgr.F02141 Eucalyptus grandis Eucgr.F02141 I
Eucgr.F02145 Eucalyptus grandis Eucgr.F02145 I
Eucgr.F02146 Eucalyptus grandis Eucgr.F02146 I
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I
evm.TU.supercontig_55.31 Carica papaya evm.TU.supercontig_55.31 I
e_gw1.171.4.1 Physcomitrella patens e_gw1.171.4.1 I
e_gw1.209.37.1 Physcomitrella patens e_gw1.209.37.1 I
gene03714-v1.0-hybrid Fragaria vesca gene03714-v1.0-hybrid I
gene05027-v1.0-hybrid Fragaria vesca gene05027-v1.0-hybrid I
gene05180-v1.0-hybrid Fragaria vesca gene05180-v1.0-hybrid I
gene11073-v1.0-hybrid Fragaria vesca gene11073-v1.0-hybrid N
gene12119-v1.0-hybrid Fragaria vesca gene12119-v1.0-hybrid I
gene12120-v1.0-hybrid Fragaria vesca gene12120-v1.0-hybrid I
gene20808-v1.0-hybrid Fragaria vesca gene20808-v1.0-hybrid I
gene30741-v1.0-hybrid Fragaria vesca gene30741-v1.0-hybrid I
GLYMA01G02880 Glycine max GLYMA01G02880 I
GLYMA02G04710 Glycine max GLYMA02G04710 I
GLYMA02G33040 Glycine max GLYMA02G33040 I
GLYMA04G10015 Glycine max GLYMA04G10015 I
GLYMA06G10020 Glycine max GLYMA06G10020 I
GLYMA15G06302 Glycine max GLYMA15G06302 I
Gorai.002G142700 Gossypium raimondii Gorai.002G142700 I
Gorai.003G090800 Gossypium raimondii Gorai.003G090800 I
Gorai.005G225500 Gossypium raimondii Gorai.005G225500 I
Gorai.010G035000 Gossypium raimondii Gorai.010G035000 I
GRMZM2G059102 Zea mays GRMZM2G059102 I
GSMUA_Achr10G19290_001 Musa acuminata GSMUA_Achr10G19290_001 I
GSMUA_Achr1G03630_001 Musa acuminata GSMUA_Achr1G03630_001 I
GSMUA_Achr3G02280_001 Musa acuminata GSMUA_Achr3G02280_001 I
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I
Lus10005325.g Linum usitatissimum Lus10005325.g I
Lus10025719.g Linum usitatissimum Lus10025719.g I
Lus10035942.g Linum usitatissimum Lus10035942.g I
MDP0000135652 Malus domestica MDP0000135652 I
MDP0000143531 Malus domestica MDP0000143531 N
MDP0000144516 Malus domestica MDP0000144516 I
MDP0000209705 Malus domestica MDP0000209705 I
MDP0000233948 Malus domestica MDP0000233948 I
MDP0000255146 Malus domestica MDP0000255146 I
MDP0000259294 Malus domestica MDP0000259294 I
MDP0000277582 Malus domestica MDP0000277582 N
MDP0000322567 Malus domestica MDP0000322567 I
MDP0000378412 Malus domestica MDP0000378412 I
MDP0000527190 Malus domestica MDP0000527190 I
mgf015964m Mimulus guttatus mgf015964m I
mgf019667m Mimulus guttatus mgf019667m I
MTR_1g053070 Medicago truncatula MTR_1g053070 I
MTR_5g032150 Medicago truncatula MTR_5g032150 I
MTR_5g032520 Medicago truncatula MTR_5g032520 I
OB11G21480 Oryza brachyantha OB11G21480 I
OBART03G06320 Oryza barthii OBART03G06320 I
OGLUM03G06330 Oryza glumaepatula OGLUM03G06330 I
OMERI03G06190 Oryza meridionalis OMERI03G06190 I
ONIVA02G06550 Oryza nivara ONIVA02G06550 I
OPUNC03G06100 Oryza punctata OPUNC03G06100 I
orange1.1g027190m.g Citrus sinensis orange1.1g027190m.g I
orange1.1g034384m.g Citrus sinensis orange1.1g034384m.g I
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I
orange1.1g040972m.g Citrus sinensis orange1.1g040972m.g I
ORGLA03G0061100 Oryza glaberrima ORGLA03G0061100 I
ORUFI03G06210 Oryza rufipogon ORUFI03G06210 I
OS03G0186600 Oryza sativa OS03G0186600 I
Pavir.Ia04527 Panicum virgatum Pavir.Ia04527 I
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I
PGSC0003DMG400009363 Solanum tuberosum PGSC0003DMG400009363 I
PGSC0003DMG400016203 Solanum tuberosum PGSC0003DMG400016203 I
PGSC0003DMG400033570 Solanum tuberosum PGSC0003DMG400033570 I
PGSC0003DMG401006771 Solanum tuberosum PGSC0003DMG401006771 I
PK20651.1 Cannabis sativa PK20651.1 I
Pm002166 Prunus mume Pm002166 I
Pm004415 Prunus mume Pm004415 I
Pm004416 Prunus mume Pm004416 I
Pm004417 Prunus mume Pm004417 I
Pm004418 Prunus mume Pm004418 I
Pm004419 Prunus mume Pm004419 I
Pm004420 Prunus mume Pm004420 I
Pm022002 Prunus mume Pm022002 I
POPTR_0002s10570 Populus trichocarpa POPTR_0002s10570 I
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I
POPTR_0007s03270 Populus trichocarpa POPTR_0007s03270 I
POPTR_0007s03290 Populus trichocarpa POPTR_0007s03290 I
POPTR_0007s14300 Populus trichocarpa POPTR_0007s14300 I
PRUPE_ppa010714mg Prunus persica PRUPE_ppa010714mg I
PRUPE_ppa010758mg Prunus persica PRUPE_ppa010758mg I
PRUPE_ppa010822mg Prunus persica PRUPE_ppa010822mg I
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I
PRUPE_ppa011123mg Prunus persica PRUPE_ppa011123mg I
PRUPE_ppa018667mg Prunus persica PRUPE_ppa018667mg I
PRUPE_ppa022274mg Prunus persica PRUPE_ppa022274mg I
PRUPE_ppb017585mg Prunus persica PRUPE_ppb017585mg I
Q9ATE3_PETHY Petunia x hybrida Q9ATE3_PETHY D
SapurV1A.0004s1140 Salix purpurea SapurV1A.0004s1140 I
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I
SapurV1A.0068s0650 Salix purpurea SapurV1A.0068s0650 I
SapurV1A.0187s0010 Salix purpurea SapurV1A.0187s0010 I
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I
SapurV1A.0463s0130 Salix purpurea SapurV1A.0463s0130 I
SapurV1A.1777s0020 Salix purpurea SapurV1A.1777s0020 I
Sb01g044810 Sorghum bicolor Sb01g044810 I
SELMODRAFT_450818 Selaginella moellendorffii SELMODRAFT_450818 I
SELMODRAFT_450937 Selaginella moellendorffii SELMODRAFT_450937 I
Solyc01g087990.2 Solanum lycopersicum Solyc01g087990.2 I
Solyc01g105800.2 Solanum lycopersicum Solyc01g105800.2 I
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I
Solyc11g010570.1 Solanum lycopersicum Solyc11g010570.1 I
SVP Arabidopsis thaliana AT2G22540 D
SVP Arabidopsis lyrata fgenesh2_kg.4__174__AT2G22540.1 I
SVP Vitis vinifera VIT_00s0313g00070 I
TCM_007378 Theobroma cacao TCM_007378 I
TCM_024579 Theobroma cacao TCM_024579 I
TCM_034501 Theobroma cacao TCM_034501 I
Thhalv10000308m.g Eutrema salsugineum Thhalv10000308m.g I
Thhalv10026757m.g Eutrema salsugineum Thhalv10026757m.g I
VIT_03s0017g00360 Vitis vinifera VIT_03s0017g00360 I
VIT_03s0017g00440 Vitis vinifera VIT_03s0017g00440 I
VIT_03s0167g00100 Vitis vinifera VIT_03s0167g00100 I
VIT_15s0024g02000 Vitis vinifera VIT_15s0024g02000 I
VIT_15s0107g00120 Vitis vinifera VIT_15s0107g00120 I