VHEMI03709 (Torrubiella hemipterigena)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VHEMI03709 T387712_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02576
M02597_2.00 		Neurospora crassa
NNNCGGVN
NBCCGNNN		 PBM
Weirauch et al.(2014)
pTH9668 		0.681 0.857
Bcin05g07400
M02571_2.00 		Botrytis cinerea
NNNCGGNN
NNCCGNNN		 PBM
Weirauch et al.(2014)
pTH8348 		0.626 0.829
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CEJ85232 Zinc cluster 61 99
CEJ85234 Zinc cluster 61 99

Links

Other Zinc cluster family TFs
Other Torrubiella hemipterigena TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29933.m001454 Ricinus communis 29933.m001454 N
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I
MDP0000131822 Malus domestica MDP0000131822 I
MDP0000289283 Malus domestica MDP0000289283 I
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N
PGSC0003DMG400008337 Solanum tuberosum PGSC0003DMG400008337 N
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N
PGSC0003DMG400020012 Solanum tuberosum PGSC0003DMG400020012 N
PGSC0003DMG400020013 Solanum tuberosum PGSC0003DMG400020013 N
PGSC0003DMG400027575 Solanum tuberosum PGSC0003DMG400027575 N
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I
Pm009880 Prunus mume Pm009880 N
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I
Solyc03g093890.2 Solanum lycopersicum Solyc03g093890.2 N
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N
Solyc03g093940.1 Solanum lycopersicum Solyc03g093940.1 N
Solyc06g033870.1 Solanum lycopersicum Solyc06g033870.1 N
Solyc06g034000.1 Solanum lycopersicum Solyc06g034000.1 N
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N
TCM_030020 Theobroma cacao TCM_030020 I
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N