estExt_Genewise1Plus.C_120314 (Cochliobolus heterostrophus C5)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 estExt_Genewise1Plus.C_120314 T389868_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
vad-3
M02614_2.00 		Neurospora crassa
NNNCGGCANWT
AWNTGCCGNNN		 PBM
Weirauch et al.(2014)
pTH7811 		0.660 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_120314 Zinc cluster 184 222

Links

Other Zinc cluster family TFs
Other Cochliobolus heterostrophus C5 TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29851.m002498 Ricinus communis 29851.m002498 I 0.000
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I 0.000
Ca_13671 Cicer arietinum Ca_13671 N 0.000
chr2.CM0262.200.nc Lotus japonicus chr2.CM0262.200.nc I 0.000
chr2.CM0308.470.nd Lotus japonicus chr2.CM0308.470.nd I 0.000
chr3.LjT23H01.130.nc Lotus japonicus chr3.LjT23H01.130.nc N 0.000
Cla010445 Citrullus lanatus Cla010445 I 0.000
GLYMA07G21160 Glycine max GLYMA07G21160 I 0.000
GLYMA11G13210 Glycine max GLYMA11G13210 N 0.000
GLYMA12G05250 Glycine max GLYMA12G05250 N 0.000
GLYMA20G01130 Glycine max GLYMA20G01130 N 0.000
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I 0.000
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I 0.000
Lus10012041.g Linum usitatissimum Lus10012041.g N 0.000
MDP0000238744 Malus domestica MDP0000238744 N 0.000
MTR_1g034210 Medicago truncatula MTR_1g034210 N 0.000
MTR_1g034240 Medicago truncatula MTR_1g034240 N 0.000
MTR_4g068320 Medicago truncatula MTR_4g068320 N 0.000
PK10791.1 Cannabis sativa PK10791.1 I 0.000
Pm021537 Prunus mume Pm021537 N 0.000
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I 0.000
TCM_006971 Theobroma cacao TCM_006971 I 0.000