BGIOSGA026461 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA026461 T000662_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.701 0.816
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.686 0.816
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.682 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.682 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.682 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA026461-PA AP2 53 104

Links

Other AP2 family TFs
Other Oryza indica TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_06135 Aegilops tauschii F775_06135 N 0.000
fgenesh2_kg.3__2134__AT3G19184.1 Arabidopsis lyrata fgenesh2_kg.3__2134__AT3G19184.1 N 0.000
AT3G19184 Arabidopsis thaliana AT3G19184 N 0.000
Bostr.19424s0744 Boechera stricta Bostr.19424s0744 N 0.000
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N 0.000
Bo6g124000 Brassica oleracea Bo6g124000 N 0.000
PK25650.1 Cannabis sativa PK25650.1 N 0.000
Cagra.5742s0010 Capsella grandiflora Cagra.5742s0010 N 0.000
Carubv10014420m.g Capsella rubella Carubv10014420m.g N 0.000
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N 0.000
Cla016258 Citrullus lanatus Cla016258 N 0.000
Ciclev10029072m.g Citrus clementina Ciclev10029072m.g N 0.000
Ciclev10002314m.g Citrus clementina Ciclev10002314m.g N 0.000
orange1.1g036915m.g Citrus sinensis orange1.1g036915m.g N 0.000
orange1.1g026276m.g Citrus sinensis orange1.1g026276m.g N 0.000
Cucsa.219930 Cucumis sativus Cucsa.219930 N 0.000
Thhalv10019015m.g Eutrema salsugineum Thhalv10019015m.g N 0.000
Gorai.013G042700 Gossypium raimondii Gorai.013G042700 N 0.000
Gorai.002G131600 Gossypium raimondii Gorai.002G131600 N 0.000
LPERR06G05590 Leersia perrieri LPERR06G05590 N 0.000
Lus10019870.g Linum usitatissimum Lus10019870.g N 0.000
Lus10014044.g Linum usitatissimum Lus10014044.g N 0.000
MTR_3g101520 Medicago truncatula MTR_3g101520 N 0.000
mgf008645m Mimulus guttatus mgf008645m N 0.000
POPTR_0009s10590 Populus trichocarpa POPTR_0009s10590 N 0.000
PRUPE_ppb024440mg Prunus persica PRUPE_ppb024440mg N 0.000
29801.m003200 Ricinus communis 29801.m003200 N 0.000
SapurV1A.0090s0770 Salix purpurea SapurV1A.0090s0770 N 0.000
Si014404m.g Setaria italica Si014404m.g N 0.000
Solyc01g108140.2 Solanum lycopersicum Solyc01g108140.2 N 0.000
PGSC0003DMG400025792 Solanum tuberosum PGSC0003DMG400025792 N 0.000
Sb07g006170 Sorghum bicolor Sb07g006170 N 0.000
TCM_007039 Theobroma cacao TCM_007039 N 0.000
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N 0.000
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N 0.000
GRMZM2G106673 Zea mays GRMZM2G106673 N 0.000