Bo7g077410 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo7g077410 T000895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.862 0.941
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.862 0.941
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.862 0.941
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.811 0.824
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.804 0.824
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.788 0.784
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.788 0.784
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.787 0.804
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.787 0.804
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.787 0.804
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.747 0.745
ERF6
M01621_2.00 		Arabidopsis thaliana
NNGCCGGCVN
NBGCCGGCNN		 PBM
Weirauch et al.(2014)
pTH7228 		0.730 0.784
ERF6
M06637_2.00 		Arabidopsis thaliana
NHNHHDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF6_col 		0.730 0.784
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.729 0.784
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.725 0.745
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.720 0.745
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.720 0.745
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.720 0.745
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.716 0.686
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.714 0.686
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.710 0.686
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.703 0.647
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.700 0.745
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.700 0.745
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.693 0.745
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.693 0.745
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.693 0.745
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.682 0.686
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.681 0.686
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.681 0.686
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.679 0.686
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.679 0.686
O65242_TOBAC
M09730_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TSI1_01 		0.678 0.588
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g077410.1 AP2 165 217

Links

Other AP2 family TFs
Other Brassica oleracea TFs

1188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11081 Aegilops tauschii F775_11081 I
AMTR_s00113p00077540 Amborella trichopoda AMTR_s00113p00077540 I
Aquca_037_00272 Aquilegia coerulea Aquca_037_00272 I
ANAC012 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002619 I
NST1 Arabidopsis lyrata scaffold_403649.1 I
NST2 Arabidopsis lyrata scaffold_503455.1 I
NAC012 Arabidopsis thaliana AT1G32770 D
NAC043 Arabidopsis thaliana AT2G46770 D
NAC066 Arabidopsis thaliana AT3G61910 D
Bostr.13158s0196 Boechera stricta Bostr.13158s0196 I
Bostr.25993s0090 Boechera stricta Bostr.25993s0090 I
Bostr.3359s0081 Boechera stricta Bostr.3359s0081 I
BRADI3G13727 Brachypodium distachyon BRADI3G13727 I
Bo4g006990 Brassica oleracea Bo4g006990 I
Bo4g197330 Brassica oleracea Bo4g197330 I
Bo5g049360 Brassica oleracea Bo5g049360 I
Bra003478 Brassica rapa Bra003478 I
Bra004509 Brassica rapa Bra004509 I
Bra007640 Brassica rapa Bra007640 I
Bra040486 Brassica rapa Bra040486 I
PK04961.1 Cannabis sativa PK04961.1 I
PK22182.1 Cannabis sativa PK22182.1 I
Cagra.0050s0024 Capsella grandiflora Cagra.0050s0024 I
Cagra.0483s0052 Capsella grandiflora Cagra.0483s0052 I
Cagra.14513s0001 Capsella grandiflora Cagra.14513s0001 I
Carubv10011900m.g Capsella rubella Carubv10011900m.g I
Carubv10019223m.g Capsella rubella Carubv10019223m.g I
Carubv10023503m.g Capsella rubella Carubv10023503m.g I
Ca_22425 Cicer arietinum Ca_22425 I
Ca_22426 Cicer arietinum Ca_22426 I
Cla006806 Citrullus lanatus Cla006806 I
Cla011508 Citrullus lanatus Cla011508 I
Ciclev10021141m.g Citrus clementina Ciclev10021141m.g I
Ciclev10024035m.g Citrus clementina Ciclev10024035m.g I
orange1.1g014260m.g Citrus sinensis orange1.1g014260m.g I
orange1.1g015853m.g Citrus sinensis orange1.1g015853m.g I
Cucsa.120870 Cucumis sativus Cucsa.120870 I
Cucsa.193460 Cucumis sativus Cucsa.193460 I
Eucgr.D01671 Eucalyptus grandis Eucgr.D01671 I
Eucgr.E01053 Eucalyptus grandis Eucgr.E01053 I
Thhalv10001506m.g Eutrema salsugineum Thhalv10001506m.g I
Thhalv10009336m.g Eutrema salsugineum Thhalv10009336m.g I
gene01881-v1.0-hybrid Fragaria vesca gene01881-v1.0-hybrid I
gene18636-v1.0-hybrid Fragaria vesca gene18636-v1.0-hybrid I
GLYMA07G05660 Glycine max GLYMA07G05660 I
GLYMA16G02200 Glycine max GLYMA16G02200 I
Gorai.001G150800 Gossypium raimondii Gorai.001G150800 I
Gorai.004G129200 Gossypium raimondii Gorai.004G129200 I
Gorai.007G112500 Gossypium raimondii Gorai.007G112500 I
Gorai.008G130300 Gossypium raimondii Gorai.008G130300 I
Gorai.008G259700 Gossypium raimondii Gorai.008G259700 I
MLOC_66924 Hordeum vulgare MLOC_66924 I
LPERR06G01790 Leersia perrieri LPERR06G01790 I
LPERR08G01440 Leersia perrieri LPERR08G01440 I
Lus10001664.g Linum usitatissimum Lus10001664.g I
Lus10002687.g Linum usitatissimum Lus10002687.g I
Lus10008271.g Linum usitatissimum Lus10008271.g I
Lus10017340.g Linum usitatissimum Lus10017340.g I
Lus10030205.g Linum usitatissimum Lus10030205.g I
Lus10033239.g Linum usitatissimum Lus10033239.g I
LjSGA_027787.1 Lotus japonicus LjSGA_027787.1 I
MDP0000140229 Malus domestica MDP0000140229 I
MDP0000563165 Malus domestica MDP0000563165 I
MDP0000762302 Malus domestica MDP0000762302 D
cassava32649.m1 Manihot esculenta cassava32649.m1 I
cassava33021.m1 Manihot esculenta cassava33021.m1 I
cassava42638.valid.m1 Manihot esculenta cassava42638.valid.m1 I
MTR_8g024480 Medicago truncatula MTR_8g024480 I
mgf022455m Mimulus guttatus mgf022455m I
GSMUA_Achr3G12230_001 Musa acuminata GSMUA_Achr3G12230_001 I
GSMUA_Achr7G05980_001 Musa acuminata GSMUA_Achr7G05980_001 I
GSMUA_Achr9G24450_001 Musa acuminata GSMUA_Achr9G24450_001 I
GSMUA_AchrUn_randomG21980_001 Musa acuminata GSMUA_AchrUn_randomG21980_001 I
OBART06G01950 Oryza barthii OBART06G01950 I
OBART08G01110 Oryza barthii OBART08G01110 I
OB06G11970 Oryza brachyantha OB06G11970 I
OB08G11290 Oryza brachyantha OB08G11290 I
ORGLA06G0019800 Oryza glaberrima ORGLA06G0019800 I
ORGLA08G0004900 Oryza glaberrima ORGLA08G0004900 I
OGLUM06G01950 Oryza glumaepatula OGLUM06G01950 I
OGLUM08G01180 Oryza glumaepatula OGLUM08G01180 I
BGIOSGA022006 Oryza indica BGIOSGA022006 I
BGIOSGA027883 Oryza indica BGIOSGA027883 I
OMERI06G01850 Oryza meridionalis OMERI06G01850 I
OMERI08G01360 Oryza meridionalis OMERI08G01360 I
ONIVA06G02290 Oryza nivara ONIVA06G02290 I
ONIVA08G01130 Oryza nivara ONIVA08G01130 I
OPUNC06G01800 Oryza punctata OPUNC06G01800 I
OPUNC08G01110 Oryza punctata OPUNC08G01110 I
ORUFI06G01950 Oryza rufipogon ORUFI06G01950 I
ORUFI08G01170 Oryza rufipogon ORUFI08G01170 I
OS06G0131700 Oryza sativa OS06G0131700 D
OS08G0115800 Oryza sativa OS08G0115800 I
Pavir.J07835 Panicum virgatum Pavir.J07835 I
Pavir.J20698 Panicum virgatum Pavir.J20698 I
Pavir.J21162 Panicum virgatum Pavir.J21162 I
PDK_20s1408241g001 Phoenix dactylifera PDK_20s1408241g001 I
POPTR_0001s45250 Populus trichocarpa POPTR_0001s45250 I
POPTR_0002s17950 Populus trichocarpa POPTR_0002s17950 I
POPTR_0011s15640 Populus trichocarpa POPTR_0011s15640 I
POPTR_0014s10060 Populus trichocarpa POPTR_0014s10060 I
Pm018292 Prunus mume Pm018292 I
Pm024260 Prunus mume Pm024260 I
PRUPE_ppa006801mg Prunus persica PRUPE_ppa006801mg I
PRUPE_ppa020746mg Prunus persica PRUPE_ppa020746mg I
27964.m000369 Ricinus communis 27964.m000369 I
30068.m002591 Ricinus communis 30068.m002591 I
SapurV1A.0003s0530 Salix purpurea SapurV1A.0003s0530 I
SapurV1A.0131s0060 Salix purpurea SapurV1A.0131s0060 I
SapurV1A.0162s0220 Salix purpurea SapurV1A.0162s0220 I
SapurV1A.0941s0070 Salix purpurea SapurV1A.0941s0070 I
SapurV1A.2717s0010 Salix purpurea SapurV1A.2717s0010 I
Si006565m.g Setaria italica Si006565m.g I
Sb07g001550 Sorghum bicolor Sb07g001550 I
Sb10g002120 Sorghum bicolor Sb10g002120 I
TCM_005047 Theobroma cacao TCM_005047 I
TCM_015621 Theobroma cacao TCM_015621 I
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I
ANAC012 Vitis vinifera VIT_02s0025g02710 I
VIT_15s0048g02660 Vitis vinifera VIT_15s0048g02660 I
GRMZM2G069047 Zea mays GRMZM2G069047 I
GRMZM2G092465 Zea mays GRMZM2G092465 I
GRMZM2G171395 Zea mays GRMZM2G171395 I