NST2 (Arabidopsis lyrata)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 scaffold_503455.1 T295624_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC066
M00978_2.00 		Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN		 PBM
Lindemose et al.(2014)
NST2 		0.962 0.956
NAC043
M02370_2.00 		Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN		 PBM
Weirauch et al.(2014)
pTH8161 		0.955 0.930
NAC043
M07192_2.00 		Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA		 Dap-seq
OMalley et al.(2016)
NST1_colamp_a 		0.955 0.930
NAC043
M07193_2.00 		Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY		 Dap-seq
OMalley et al.(2016)
NST1_col_v31 		0.955 0.930
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.918 0.860
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.901 0.877
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.896 0.877
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_503455.1 NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Arabidopsis lyrata TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra003478 Brassica rapa Bra003478 I 0.968
Bra007640 Brassica rapa Bra007640 I 0.968
Bostr.13158s0196 Boechera stricta Bostr.13158s0196 I 0.968
Cagra.0483s0052 Capsella grandiflora Cagra.0483s0052 I 0.965
Carubv10019223m.g Capsella rubella Carubv10019223m.g I 0.965
NAC066 Arabidopsis thaliana AT3G61910 D 0.962
Bo4g197330 Brassica oleracea Bo4g197330 I 0.957
Bo6g079180 Brassica oleracea Bo6g079180 I 0.957
Bra040486 Brassica rapa Bra040486 I 0.957
NAC043 Arabidopsis thaliana AT2G46770 D 0.955
Bo4g006990 Brassica oleracea Bo4g006990 I 0.955
Bra004509 Brassica rapa Bra004509 I 0.955
NST1 Arabidopsis lyrata scaffold_403649.1 I 0.955
Bostr.25993s0090 Boechera stricta Bostr.25993s0090 I 0.955
Cagra.0050s0024 Capsella grandiflora Cagra.0050s0024 I 0.955
Carubv10023503m.g Capsella rubella Carubv10023503m.g I 0.955
Thhalv10001506m.g Eutrema salsugineum Thhalv10001506m.g I 0.955
Ca_22425 Cicer arietinum Ca_22425 I 0.940
Lus10002687.g Linum usitatissimum Lus10002687.g I 0.940
AMTR_s00113p00077540 Amborella trichopoda AMTR_s00113p00077540 I 0.939
GLYMA07G05660 Glycine max GLYMA07G05660 I 0.939
GLYMA16G02200 Glycine max GLYMA16G02200 I 0.939
MTR_8g024480 Medicago truncatula MTR_8g024480 I 0.939
POPTR_0014s10060 Populus trichocarpa POPTR_0014s10060 I 0.939
Ca_22426 Cicer arietinum Ca_22426 I 0.939
SapurV1A.0162s0220 Salix purpurea SapurV1A.0162s0220 I 0.939
LjSGA_027787.1 Lotus japonicus LjSGA_027787.1 I 0.939
PRUPE_ppa020746mg Prunus persica PRUPE_ppa020746mg I 0.938
Pm018292 Prunus mume Pm018292 I 0.938
gene18636-v1.0-hybrid Fragaria vesca gene18636-v1.0-hybrid I 0.938
Gorai.001G150800 Gossypium raimondii Gorai.001G150800 I 0.938
Lus10030205.g Linum usitatissimum Lus10030205.g I 0.938
MDP0000563165 Malus domestica MDP0000563165 I 0.938
TCM_005047 Theobroma cacao TCM_005047 I 0.937
Cla006806 Citrullus lanatus Cla006806 I 0.937
27964.m000369 Ricinus communis 27964.m000369 I 0.937
Cucsa.120870 Cucumis sativus Cucsa.120870 I 0.937
Gorai.007G112500 Gossypium raimondii Gorai.007G112500 I 0.937
POPTR_0002s17950 Populus trichocarpa POPTR_0002s17950 I 0.936
cassava33021.m1 Manihot esculenta cassava33021.m1 I 0.936
PK04961.1 Cannabis sativa PK04961.1 I 0.933
Cla011508 Citrullus lanatus Cla011508 I 0.930
Cucsa.193460 Cucumis sativus Cucsa.193460 I 0.930
Aquca_037_00272 Aquilegia coerulea Aquca_037_00272 I 0.930
GSMUA_Achr3G12230_001 Musa acuminata GSMUA_Achr3G12230_001 I 0.929
GSMUA_Achr9G24450_001 Musa acuminata GSMUA_Achr9G24450_001 I 0.927
Eucgr.D01671 Eucalyptus grandis Eucgr.D01671 I 0.927
GSMUA_AchrUn_randomG21980_001 Musa acuminata GSMUA_AchrUn_randomG21980_001 I 0.926
VIT_15s0048g02660 Vitis vinifera VIT_15s0048g02660 I 0.926
Ciclev10024035m.g Citrus clementina Ciclev10024035m.g I 0.925
orange1.1g015853m.g Citrus sinensis orange1.1g015853m.g I 0.925
mgf022455m Mimulus guttatus mgf022455m I 0.924
ANAC012 Vitis vinifera VIT_02s0025g02710 I 0.923
PDK_20s1408241g001 Phoenix dactylifera PDK_20s1408241g001 I 0.923
OMERI08G01360 Oryza meridionalis OMERI08G01360 I 0.920
BGIOSGA022006 Oryza indica BGIOSGA022006 I 0.918
LPERR06G01790 Leersia perrieri LPERR06G01790 I 0.918
OB06G11970 Oryza brachyantha OB06G11970 I 0.918
OBART06G01950 Oryza barthii OBART06G01950 I 0.918
OGLUM06G01950 Oryza glumaepatula OGLUM06G01950 I 0.918
OMERI06G01850 Oryza meridionalis OMERI06G01850 I 0.918
ONIVA06G02290 Oryza nivara ONIVA06G02290 I 0.918
OPUNC06G01800 Oryza punctata OPUNC06G01800 I 0.918
ORGLA06G0019800 Oryza glaberrima ORGLA06G0019800 I 0.918
ORUFI06G01950 Oryza rufipogon ORUFI06G01950 I 0.918
OS06G0131700 Oryza sativa OS06G0131700 D 0.918
SapurV1A.0003s0530 Salix purpurea SapurV1A.0003s0530 I 0.917
GSMUA_Achr7G05980_001 Musa acuminata GSMUA_Achr7G05980_001 I 0.916
BGIOSGA027883 Oryza indica BGIOSGA027883 I 0.912
F775_11081 Aegilops tauschii F775_11081 I 0.912
GRMZM2G092465 Zea mays GRMZM2G092465 I 0.912
MLOC_66924 Hordeum vulgare MLOC_66924 I 0.912
OB08G11290 Oryza brachyantha OB08G11290 I 0.912
OBART08G01110 Oryza barthii OBART08G01110 I 0.912
OGLUM08G01180 Oryza glumaepatula OGLUM08G01180 I 0.912
ONIVA08G01130 Oryza nivara ONIVA08G01130 I 0.912
OPUNC08G01110 Oryza punctata OPUNC08G01110 I 0.912
ORGLA08G0004900 Oryza glaberrima ORGLA08G0004900 I 0.912
ORUFI08G01170 Oryza rufipogon ORUFI08G01170 I 0.912
OS08G0115800 Oryza sativa OS08G0115800 I 0.912
Sb07g001550 Sorghum bicolor Sb07g001550 I 0.912
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I 0.912
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I 0.912
Pavir.J20698 Panicum virgatum Pavir.J20698 I 0.912
Pavir.J21162 Panicum virgatum Pavir.J21162 I 0.912
GRMZM2G171395 Zea mays GRMZM2G171395 I 0.910
LPERR08G01440 Leersia perrieri LPERR08G01440 I 0.910
Sb10g002120 Sorghum bicolor Sb10g002120 I 0.910
Si006565m.g Setaria italica Si006565m.g I 0.909
Pavir.J07835 Panicum virgatum Pavir.J07835 I 0.909
Gorai.008G130300 Gossypium raimondii Gorai.008G130300 I 0.907
GRMZM2G069047 Zea mays GRMZM2G069047 I 0.906
BRADI3G13727 Brachypodium distachyon BRADI3G13727 I 0.905
cassava32649.m1 Manihot esculenta cassava32649.m1 I 0.904
Gorai.006G205300 Gossypium raimondii Gorai.006G205300 I 0.904
MDP0000140229 Malus domestica MDP0000140229 I 0.901
MDP0000762302 Malus domestica MDP0000762302 D 0.901
Lus10001664.g Linum usitatissimum Lus10001664.g I 0.899
Lus10017340.g Linum usitatissimum Lus10017340.g I 0.899
POPTR_0011s15640 Populus trichocarpa POPTR_0011s15640 I 0.898
Bostr.3359s0081 Boechera stricta Bostr.3359s0081 I 0.898
Eucgr.E01053 Eucalyptus grandis Eucgr.E01053 I 0.898
SapurV1A.0131s0060 Salix purpurea SapurV1A.0131s0060 I 0.898
PK22182.1 Cannabis sativa PK22182.1 I 0.898
NAC012 Arabidopsis thaliana AT1G32770 D 0.896
Bo5g049360 Brassica oleracea Bo5g049360 I 0.896
ANAC012 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002619 I 0.896
POPTR_0001s45250 Populus trichocarpa POPTR_0001s45250 I 0.896
Cagra.14513s0001 Capsella grandiflora Cagra.14513s0001 I 0.896
Carubv10011900m.g Capsella rubella Carubv10011900m.g I 0.896
Gorai.003G077700 Gossypium raimondii Gorai.003G077700 I 0.896
Gorai.008G259700 Gossypium raimondii Gorai.008G259700 I 0.896
Lus10008271.g Linum usitatissimum Lus10008271.g I 0.896
Lus10033239.g Linum usitatissimum Lus10033239.g I 0.896
SapurV1A.0941s0070 Salix purpurea SapurV1A.0941s0070 I 0.896
SapurV1A.2717s0010 Salix purpurea SapurV1A.2717s0010 I 0.896
Thhalv10009336m.g Eutrema salsugineum Thhalv10009336m.g I 0.896
PRUPE_ppa006801mg Prunus persica PRUPE_ppa006801mg I 0.895
TCM_015621 Theobroma cacao TCM_015621 I 0.895
Pm024260 Prunus mume Pm024260 I 0.895
30068.m002591 Ricinus communis 30068.m002591 I 0.895
cassava42638.valid.m1 Manihot esculenta cassava42638.valid.m1 I 0.895
Ciclev10021141m.g Citrus clementina Ciclev10021141m.g I 0.895
gene01881-v1.0-hybrid Fragaria vesca gene01881-v1.0-hybrid I 0.895
orange1.1g014260m.g Citrus sinensis orange1.1g014260m.g I 0.895
Gorai.004G129200 Gossypium raimondii Gorai.004G129200 I 0.894
evm.TU.supercontig_37.89 Carica papaya evm.TU.supercontig_37.89 I 0.893
Bra023288 Brassica rapa Bra023288 I 0.892
cassava45846.m1 Manihot esculenta cassava45846.m1 I 0.890
gene18635-v1.0-hybrid Fragaria vesca gene18635-v1.0-hybrid I 0.890
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.890
GRMZM2G091490 Zea mays GRMZM2G091490 I 0.889
TCM_014939 Theobroma cacao TCM_014939 I 0.887
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.887
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.887
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.887
Bo5g086900 Brassica oleracea Bo5g086900 I 0.886
Bra010183 Brassica rapa Bra010183 I 0.886
mgf021916m Mimulus guttatus mgf021916m I 0.886
PGSC0003DMG400011268 Solanum tuberosum PGSC0003DMG400011268 I 0.884
Solyc10g005010.2 Solanum lycopersicum Solyc10g005010.2 I 0.884
Cla006372 Citrullus lanatus Cla006372 I 0.883
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.883
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.882
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.882
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.882
Pm019488 Prunus mume Pm019488 I 0.882
Pm019490 Prunus mume Pm019490 I 0.882
30147.m014211 Ricinus communis 30147.m014211 I 0.882
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.881
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.881
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.880
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I 0.880
GSMUA_Achr2G20020_001 Musa acuminata GSMUA_Achr2G20020_001 I 0.879
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.877
Traes_4AL_3AFF9664B Triticum aestivum Traes_4AL_3AFF9664B I 0.876
Traes_4AL_8FABAA6C3 Triticum aestivum Traes_4AL_8FABAA6C3 I 0.876
TRIUR3_14545 Triticum urartu TRIUR3_14545 I 0.876
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.876
GSMUA_Achr10G14400_001 Musa acuminata GSMUA_Achr10G14400_001 I 0.875
Aquca_030_00252 Aquilegia coerulea Aquca_030_00252 I 0.873