ONIVA10G21000 (Oryza nivara)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ONIVA10G21000 T003670_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.798 0.940
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.754 0.880
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.754 0.880
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.754 0.880
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.754 0.900
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.754 0.900
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.746 0.880
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.746 0.880
AT3G16280
M06618_2.00 		Arabidopsis thaliana
NDNCACCGACANHN
NDNTGTCGGTGNHN		 Dap-seq
OMalley et al.(2016)
AT3G16280_col_a 		0.713 0.880
AT3G16280
M06619_2.00 		Arabidopsis thaliana
BCACCGACAHWNNN
NNNWDTGTCGGTGV		 Dap-seq
OMalley et al.(2016)
AT3G16280_colamp_a 		0.713 0.880
Q5MAR7_BRANA
M09742_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII1_01 		0.705 0.880
Q3HS44_BRANA
M09741_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII2_01 		0.705 0.880
Q3HS43_BRANA
M09740_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBIII3_01 		0.705 0.880
ERF039
M01620_2.00 		Arabidopsis thaliana
NNRCCGACDN
NHGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH8101 		0.696 0.880
ERF039
M06635_2.00 		Arabidopsis thaliana
HNNHDYCRCCGMCRN
NYGKCGGYGRHDNND		 Dap-seq
OMalley et al.(2016)
At4g16750_col_a 		0.696 0.880
ERF039
M06636_2.00 		Arabidopsis thaliana
NNNNNNYCACCGACAHH
DDTGTCGGTGRNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g16750_colamp_a 		0.696 0.880
ERF038
M06608_2.00 		Arabidopsis thaliana
NHNHHDYCRCCGACA
TGTCGGYGRHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF38_col_a 		0.696 0.860
ERF037
M00843_2.00 		Arabidopsis thaliana
NRCCGACRN
NYGTCGGYN		 PBM
Franco-Zorrilla et al.(2014)
At1g77200 		0.690 0.860
ERF037
M06599_2.00 		Arabidopsis thaliana
YCRCCGACAHHNNH
DNNDDTGTCGGYGR		 Dap-seq
OMalley et al.(2016)
AT1G77200_col_a 		0.690 0.860
ERF037
M06600_2.00 		Arabidopsis thaliana
NNYACCGACAHN
NDTGTCGGTRNN		 Dap-seq
OMalley et al.(2016)
AT1G77200_colamp_a 		0.690 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA10G21000.1 AP2 94 145

Links

Other AP2 family TFs
Other Oryza nivara TFs

430 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N
Aquca_015_00085 Aquilegia coerulea Aquca_015_00085 I
Aquca_015_00088 Aquilegia coerulea Aquca_015_00088 I
Aquca_015_00090 Aquilegia coerulea Aquca_015_00090 I
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I
MYB75 Arabidopsis thaliana AT1G56650 I
MYB113 Arabidopsis thaliana AT1G66370 D
MYB114 Arabidopsis thaliana AT1G66380 I
MYB90 Arabidopsis thaliana AT1G66390 I
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I
Bo00835s060 Brassica oleracea Bo00835s060 I
Bo6g099880 Brassica oleracea Bo6g099880 I
Bo6g100940 Brassica oleracea Bo6g100940 I
Bra001917 Brassica rapa Bra001917 I
Bra004162 Brassica rapa Bra004162 I
Bra039763 Brassica rapa Bra039763 I
PK05760.1 Cannabis sativa PK05760.1 I
PK17827.1 Cannabis sativa PK17827.1 I
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I
Carubv10020856m.g Capsella rubella Carubv10020856m.g I
Carubv10020888m.g Capsella rubella Carubv10020888m.g I
evm.TU.contig_42663.2 Carica papaya evm.TU.contig_42663.2 I
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I
Ca_19630 Cicer arietinum Ca_19630 I
Ca_22078 Cicer arietinum Ca_22078 I
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I
Ciclev10017654m.g Citrus clementina Ciclev10017654m.g I
orange1.1g044864m.g Citrus sinensis orange1.1g044864m.g I
Cucsa.277570 Cucumis sativus Cucsa.277570 I
Eucgr.B00865 Eucalyptus grandis Eucgr.B00865 I
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I
Eucgr.J01555 Eucalyptus grandis Eucgr.J01555 I
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I
Eucgr.J01573 Eucalyptus grandis Eucgr.J01573 I
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I
GLYMA07G16980 Glycine max GLYMA07G16980 I
GLYMA09G36966 Glycine max GLYMA09G36966 I
GLYMA09G36983 Glycine max GLYMA09G36983 I
GLYMA09G37010 Glycine max GLYMA09G37010 I
GLYMA18G41520 Glycine max GLYMA18G41520 I
GLYMA18G49670 Glycine max GLYMA18G49670 I
GLYMA18G49690 Glycine max GLYMA18G49690 I
GLYMA19G02980 Glycine max GLYMA19G02980 I
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I
Lus10003277.g Linum usitatissimum Lus10003277.g I
Lus10009129.g Linum usitatissimum Lus10009129.g I
Lus10009130.g Linum usitatissimum Lus10009130.g I
Lus10028513.g Linum usitatissimum Lus10028513.g I
Lus10028514.g Linum usitatissimum Lus10028514.g I
Lus10042522.g Linum usitatissimum Lus10042522.g I
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I
MDP0000192051 Malus domestica MDP0000192051 I
MDP0000478453 Malus domestica MDP0000478453 I
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I
MTR_0193s0090 Medicago truncatula MTR_0193s0090 I
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I
MTR_0247s0040 Medicago truncatula MTR_0247s0040 I
MTR_5g078800 Medicago truncatula MTR_5g078800 I
MTR_5g078860 Medicago truncatula MTR_5g078860 I
MTR_5g078910 Medicago truncatula MTR_5g078910 I
MTR_5g078930 Medicago truncatula MTR_5g078930 I
MTR_5g078950 Medicago truncatula MTR_5g078950 I
MTR_5g079120 Medicago truncatula MTR_5g079120 I
MTR_5g079220 Medicago truncatula MTR_5g079220 I
MTR_5g079290 Medicago truncatula MTR_5g079290 I
MTR_7g017260 Medicago truncatula MTR_7g017260 I
MTR_8g060940 Medicago truncatula MTR_8g060940 I
mgf019317m Mimulus guttatus mgf019317m I
mgf022565m Mimulus guttatus mgf022565m I
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I
PDK_20s1447601g001 Phoenix dactylifera PDK_20s1447601g001 I
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I
POPTR_0005s14460 Populus trichocarpa POPTR_0005s14460 I
POPTR_0005s14470 Populus trichocarpa POPTR_0005s14470 I
POPTR_0005s14480 Populus trichocarpa POPTR_0005s14480 I
POPTR_0005s14490 Populus trichocarpa POPTR_0005s14490 I
Pm025102 Prunus mume Pm025102 I
Pm025429 Prunus mume Pm025429 I
Pm029440 Prunus mume Pm029440 I
Pm029442 Prunus mume Pm029442 I
Pm031337 Prunus mume Pm031337 I
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I
PRUPE_ppa024617mg Prunus persica PRUPE_ppa024617mg N
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I
27763.m000042 Ricinus communis 27763.m000042 I
30128.m008730 Ricinus communis 30128.m008730 I
SapurV1A.0230s0240 Salix purpurea SapurV1A.0230s0240 I
SapurV1A.0230s0250 Salix purpurea SapurV1A.0230s0250 I
SapurV1A.0230s0260 Salix purpurea SapurV1A.0230s0260 I
Si038905m.g Setaria italica Si038905m.g I
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I
Sb01g032770 Sorghum bicolor Sb01g032770 I
TCM_019192 Theobroma cacao TCM_019192 I
TCM_026054 Theobroma cacao TCM_026054 I
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I