CMQ_6414 (Grosmannia clavigera)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 CMQ_6414 T014333_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU03892
M01670_2.00
Neurospora crassa
HAAATTTD

HAAATTTD
PBM
Weirauch et al.(2014)
pTH8975
0.553 0.632
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX01472 ARID/BRIGHT 14 102

Links

Other ARID/BRIGHT family TFs
Other Grosmannia clavigera TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_05429 Aegilops tauschii F775_05429 I
Aquca_001_00822 Aquilegia coerulea Aquca_001_00822 I
HY5 Arabidopsis lyrata scaffold_601144.1 I
HY5 Arabidopsis thaliana AT5G11260 D
Bostr.23997s0021 Boechera stricta Bostr.23997s0021 I
BRADI3G07540 Brachypodium distachyon BRADI3G07540 I
Bo9g171430 Brassica oleracea Bo9g171430 I
Bo2g010330 Brassica oleracea Bo2g010330 I
Bra008976 Brassica rapa Bra008976 I
Bra023317 Brassica rapa Bra023317 I
PK17235.1 Cannabis sativa PK17235.1 I
Cagra.7526s0027 Capsella grandiflora Cagra.7526s0027 I
evm.TU.supercontig_115.9 Carica papaya evm.TU.supercontig_115.9 I
Ca_21380 Cicer arietinum Ca_21380 I
Cla022656 Citrullus lanatus Cla022656 I
Ciclev10009720m.g Citrus clementina Ciclev10009720m.g I
orange1.1g030957m.g Citrus sinensis orange1.1g030957m.g I
Cucsa.162360 Cucumis sativus Cucsa.162360 I
Eucgr.C02802 Eucalyptus grandis Eucgr.C02802 I
Thhalv10004860m.g Eutrema salsugineum Thhalv10004860m.g I
Thhalv10014851m.g Eutrema salsugineum Thhalv10014851m.g I
gene11666-v1.0-hybrid Fragaria vesca gene11666-v1.0-hybrid I
GLYMA18G14750 Glycine max GLYMA18G14750 I
GLYMA08G41450 Glycine max GLYMA08G41450 I
Q39895_SOYBN Glycine max Q39895_SOYBN D
LPERR02G06800 Leersia perrieri LPERR02G06800 I
Lus10002900.g Linum usitatissimum Lus10002900.g I
LjB12O06.40.nc Lotus japonicus LjB12O06.40.nc I
chr6.LjT14A08.90.nd Lotus japonicus chr6.LjT14A08.90.nd I
MDP0000586302 Malus domestica MDP0000586302 I
MDP0000264514 Malus domestica MDP0000264514 I
cassava8163.valid.m1 Manihot esculenta cassava8163.valid.m1 I
MTR_3g436010 Medicago truncatula MTR_3g436010 I
mgf012104m Mimulus guttatus mgf012104m I
GSMUA_Achr10G27050_001 Musa acuminata GSMUA_Achr10G27050_001 I
GSMUA_Achr5G06060_001 Musa acuminata GSMUA_Achr5G06060_001 I
GSMUA_Achr7G09980_001 Musa acuminata GSMUA_Achr7G09980_001 I
OB02G17160 Oryza brachyantha OB02G17160 I
ORGLA02G0074000 Oryza glaberrima ORGLA02G0074000 I
OGLUM02G07920 Oryza glumaepatula OGLUM02G07920 I
BGIOSGA006916 Oryza indica BGIOSGA006916 I
OLONG_023968 Oryza longistaminata OLONG_023968 I
ONIVA02G09400 Oryza nivara ONIVA02G09400 I
OPUNC02G07060 Oryza punctata OPUNC02G07060 I
OS02G0203000 Oryza sativa OS02G0203000 I
Pavir.Db01231 Panicum virgatum Pavir.Db01231 I
Pavir.Aa02966 Panicum virgatum Pavir.Aa02966 I
Pavir.Da00549 Panicum virgatum Pavir.Da00549 I
POPTR_0006s26800 Populus trichocarpa POPTR_0006s26800 I
POPTR_0018s01530 Populus trichocarpa POPTR_0018s01530 I
PRUPE_ppa012064mg Prunus persica PRUPE_ppa012064mg I
29848.m004650 Ricinus communis 29848.m004650 I
SapurV1A.0073s0400 Salix purpurea SapurV1A.0073s0400 I
Si018524m.g Setaria italica Si018524m.g I
Solyc08g061130.2 Solanum lycopersicum Solyc08g061130.2 I
PGSC0003DMG401020784 Solanum tuberosum PGSC0003DMG401020784 I
Sb04g007060 Sorghum bicolor Sb04g007060 I
Sb10g023420 Sorghum bicolor Sb10g023420 I
Traes_6AS_AFF47E71C Triticum aestivum Traes_6AS_AFF47E71C I
Traes_6BS_993CBD840 Triticum aestivum Traes_6BS_993CBD840 I
HY5 Vitis vinifera VIT_04s0008g05210 I
GRMZM2G140355 Zea mays GRMZM2G140355 I
GRMZM2G137046 Zea mays GRMZM2G137046 I