ARID5B (Callithrix jacchus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSCJAG00000007072 T014474_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5b
M01661_2.00 		Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426 		0.785 1.000
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.785 1.000
Arid5b
M08708_2.00 		Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C 		0.785 1.000
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.785 1.000
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.632 0.744
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.632 0.744
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.605 0.605
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.482 0.593
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000013137 ARID/BRIGHT 229 315

Links

Other ARID/BRIGHT family TFs
Other Callithrix jacchus TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_18470 Aegilops tauschii F775_18470 I
AMTR_s00092p00113360 Amborella trichopoda AMTR_s00092p00113360 I
AMTR_s00154p00072430 Amborella trichopoda AMTR_s00154p00072430 I
Aquca_002_00878 Aquilegia coerulea Aquca_002_00878 I
Aquca_057_00119 Aquilegia coerulea Aquca_057_00119 I
PTF1 Arabidopsis lyrata fgenesh2_kg.3__146__AT3G02150.2 I
TCP17 Arabidopsis lyrata fgenesh2_kg.6__773__AT5G08070.1 I
TCP5 Arabidopsis lyrata fgenesh2_kg.8__2066__AT5G60970.1 D
TCP13 Arabidopsis thaliana AT3G02150 D
TCP17 Arabidopsis thaliana AT5G08070 D
TCP5 Arabidopsis thaliana AT5G60970 D
Bostr.13129s0160 Boechera stricta Bostr.13129s0160 I
Bostr.1460s0130 Boechera stricta Bostr.1460s0130 I
Bostr.26833s0140 Boechera stricta Bostr.26833s0140 I
BRADI1G06460 Brachypodium distachyon BRADI1G06460 I
BRADI1G58450 Brachypodium distachyon BRADI1G58450 I
BRADI2G06890 Brachypodium distachyon BRADI2G06890 I
BRADI2G20060 Brachypodium distachyon BRADI2G20060 I
BRADI2G50687 Brachypodium distachyon BRADI2G50687 I
BRADI4G01547 Brachypodium distachyon BRADI4G01547 I
Bo2g161240 Brassica oleracea Bo2g161240 I
Bo3g004670 Brassica oleracea Bo3g004670 I
Bo3g055460 Brassica oleracea Bo3g055460 I
Bo3g147760 Brassica oleracea Bo3g147760 I
Bo5g152840 Brassica oleracea Bo5g152840 I
Bo7g098260 Brassica oleracea Bo7g098260 I
Bra001032 Brassica rapa Bra001032 I
Bra005967 Brassica rapa Bra005967 I
Bra010789 Brassica rapa Bra010789 I
Bra012990 Brassica rapa Bra012990 I
Bra029344 Brassica rapa Bra029344 I
Bra039158 Brassica rapa Bra039158 I
PK04257.1 Cannabis sativa PK04257.1 I
PK10344.1 Cannabis sativa PK10344.1 D
PK12847.1 Cannabis sativa PK12847.1 I
PK16724.1 Cannabis sativa PK16724.1 I
PK17676.1 Cannabis sativa PK17676.1 I
Cagra.0083s0006 Capsella grandiflora Cagra.0083s0006 I
Cagra.1365s0013 Capsella grandiflora Cagra.1365s0013 I
Cagra.3678s0010 Capsella grandiflora Cagra.3678s0010 I
Cagra.3823s0015 Capsella grandiflora Cagra.3823s0015 I
Carubv10001730m.g Capsella rubella Carubv10001730m.g I
Carubv10011113m.g Capsella rubella Carubv10011113m.g I
Carubv10014042m.g Capsella rubella Carubv10014042m.g I
Carubv10026656m.g Capsella rubella Carubv10026656m.g I
evm.TU.supercontig_131.71 Carica papaya evm.TU.supercontig_131.71 I
evm.TU.supercontig_14.188 Carica papaya evm.TU.supercontig_14.188 I
evm.TU.supercontig_17.1 Carica papaya evm.TU.supercontig_17.1 I
evm.TU.supercontig_94.62 Carica papaya evm.TU.supercontig_94.62 I
Ca_00482 Cicer arietinum Ca_00482 I
Ca_05033 Cicer arietinum Ca_05033 I
Ca_13216 Cicer arietinum Ca_13216 I
Ca_24196 Cicer arietinum Ca_24196 I
Ca_24948 Cicer arietinum Ca_24948 I
Cla010936 Citrullus lanatus Cla010936 I
Cla018836 Citrullus lanatus Cla018836 I
Cla019340 Citrullus lanatus Cla019340 I
Cla019865 Citrullus lanatus Cla019865 I
Ciclev10011887m.g Citrus clementina Ciclev10011887m.g I
Ciclev10014986m.g Citrus clementina Ciclev10014986m.g I
Ciclev10020626m.g Citrus clementina Ciclev10020626m.g I
orange1.1g009938m.g Citrus sinensis orange1.1g009938m.g I
orange1.1g015799m.g Citrus sinensis orange1.1g015799m.g I
orange1.1g017725m.g Citrus sinensis orange1.1g017725m.g I
Cucsa.047860 Cucumis sativus Cucsa.047860 I
Cucsa.111880 Cucumis sativus Cucsa.111880 I
Cucsa.113300 Cucumis sativus Cucsa.113300 I
Cucsa.198300 Cucumis sativus Cucsa.198300 I
Cucsa.215290 Cucumis sativus Cucsa.215290 I
Eucgr.B00608 Eucalyptus grandis Eucgr.B00608 I
Eucgr.F01204 Eucalyptus grandis Eucgr.F01204 I
Eucgr.I02038 Eucalyptus grandis Eucgr.I02038 I
Eucgr.K02535 Eucalyptus grandis Eucgr.K02535 I
Thhalv10004440m.g Eutrema salsugineum Thhalv10004440m.g I
Thhalv10014467m.g Eutrema salsugineum Thhalv10014467m.g I
Thhalv10021021m.g Eutrema salsugineum Thhalv10021021m.g I
gene04255-v1.0-hybrid Fragaria vesca gene04255-v1.0-hybrid I
gene26101-v1.0-hybrid Fragaria vesca gene26101-v1.0-hybrid I
gene30370-v1.0-hybrid Fragaria vesca gene30370-v1.0-hybrid I
GLYMA04G32324 Glycine max GLYMA04G32324 I
GLYMA05G00300 Glycine max GLYMA05G00300 I
GLYMA05G27367 Glycine max GLYMA05G27367 I
GLYMA06G22240 Glycine max GLYMA06G22240 I
GLYMA08G10350 Glycine max GLYMA08G10350 I
GLYMA08G27155 Glycine max GLYMA08G27155 I
GLYMA13G29160 Glycine max GLYMA13G29160 I
GLYMA13G36840 Glycine max GLYMA13G36840 I
GLYMA15G09910 Glycine max GLYMA15G09910 I
GLYMA17G08761 Glycine max GLYMA17G08761 I
GLYMA18G50371 Glycine max GLYMA18G50371 I
GLYMA19G03786 Glycine max GLYMA19G03786 I
Gorai.001G076700 Gossypium raimondii Gorai.001G076700 I
Gorai.006G009800 Gossypium raimondii Gorai.006G009800 I
Gorai.008G199700 Gossypium raimondii Gorai.008G199700 I
Gorai.009G153900 Gossypium raimondii Gorai.009G153900 I
Gorai.011G046000 Gossypium raimondii Gorai.011G046000 I
Gorai.012G048500 Gossypium raimondii Gorai.012G048500 I
MLOC_10214 Hordeum vulgare MLOC_10214 I
MLOC_14785 Hordeum vulgare MLOC_14785 I
MLOC_63989 Hordeum vulgare MLOC_63989 I
MLOC_68285 Hordeum vulgare MLOC_68285 I
MLOC_70266 Hordeum vulgare MLOC_70266 I
MLOC_72581 Hordeum vulgare MLOC_72581 I
LPERR01G06830 Leersia perrieri LPERR01G06830 I
LPERR01G27380 Leersia perrieri LPERR01G27380 I
LPERR03G30870 Leersia perrieri LPERR03G30870 I
LPERR05G18480 Leersia perrieri LPERR05G18480 I
LPERR12G15920 Leersia perrieri LPERR12G15920 I
Lus10023297.g Linum usitatissimum Lus10023297.g I
Lus10032984.g Linum usitatissimum Lus10032984.g I
Lus10034679.g Linum usitatissimum Lus10034679.g I
chr4.CM0500.330.nd Lotus japonicus chr4.CM0500.330.nd I
LjSGA_022391.1 Lotus japonicus LjSGA_022391.1 I
LjT20A21.20.nc Lotus japonicus LjT20A21.20.nc D
MDP0000120671 Malus domestica MDP0000120671 I
MDP0000130524 Malus domestica MDP0000130524 I
MDP0000155433 Malus domestica MDP0000155433 I
MDP0000199422 Malus domestica MDP0000199422 I
MDP0000202241 Malus domestica MDP0000202241 I
MDP0000253526 Malus domestica MDP0000253526 I
MDP0000287069 Malus domestica MDP0000287069 I
MDP0000320363 Malus domestica MDP0000320363 I
MDP0000373350 Malus domestica MDP0000373350 I
MDP0000388684 Malus domestica MDP0000388684 I
MDP0000534647 Malus domestica MDP0000534647 I
MDP0000594000 Malus domestica MDP0000594000 I
MDP0000617746 Malus domestica MDP0000617746 I
MDP0000692406 Malus domestica MDP0000692406 I
MDP0000927314 Malus domestica MDP0000927314 I
cassava2420.valid.m1 Manihot esculenta cassava2420.valid.m1 I
cassava29094.valid.m1 Manihot esculenta cassava29094.valid.m1 I
cassava30483.valid.m1 Manihot esculenta cassava30483.valid.m1 I
cassava32529.m1 Manihot esculenta cassava32529.m1 I
cassava46272.m1 Manihot esculenta cassava46272.m1 I
cassava7638.valid.m1 Manihot esculenta cassava7638.valid.m1 I
MTR_3g026050 Medicago truncatula MTR_3g026050 I
MTR_4g109660 Medicago truncatula MTR_4g109660 I
MTR_6g015350 Medicago truncatula MTR_6g015350 I
MTR_8g463380 Medicago truncatula MTR_8g463380 I
mgf006703m Mimulus guttatus mgf006703m I
mgf007729m Mimulus guttatus mgf007729m I
mgf008626m Mimulus guttatus mgf008626m I
mgf016959m Mimulus guttatus mgf016959m I
mgf024988m Mimulus guttatus mgf024988m I
GSMUA_Achr10G14340_001 Musa acuminata GSMUA_Achr10G14340_001 I
GSMUA_Achr2G12990_001 Musa acuminata GSMUA_Achr2G12990_001 I
GSMUA_Achr4G22960_001 Musa acuminata GSMUA_Achr4G22960_001 I
GSMUA_Achr4G31520_001 Musa acuminata GSMUA_Achr4G31520_001 I
GSMUA_Achr4G32850_001 Musa acuminata GSMUA_Achr4G32850_001 I
GSMUA_Achr5G02530_001 Musa acuminata GSMUA_Achr5G02530_001 I
GSMUA_Achr6G27420_001 Musa acuminata GSMUA_Achr6G27420_001 I
GSMUA_Achr7G01160_001 Musa acuminata GSMUA_Achr7G01160_001 I
GSMUA_Achr7G13980_001 Musa acuminata GSMUA_Achr7G13980_001 I
OBART01G07230 Oryza barthii OBART01G07230 I
OBART01G31910 Oryza barthii OBART01G31910 I
OBART05G22490 Oryza barthii OBART05G22490 I
ORGLA01G0062300 Oryza glaberrima ORGLA01G0062300 I
ORGLA01G0259400 Oryza glaberrima ORGLA01G0259400 I
ORGLA05G0197200 Oryza glaberrima ORGLA05G0197200 I
ORGLA12G0161900 Oryza glaberrima ORGLA12G0161900 I
OGLUM01G08160 Oryza glumaepatula OGLUM01G08160 I
OGLUM01G36040 Oryza glumaepatula OGLUM01G36040 I
OGLUM03G36280 Oryza glumaepatula OGLUM03G36280 I
OGLUM05G23780 Oryza glumaepatula OGLUM05G23780 I
OGLUM12G20570 Oryza glumaepatula OGLUM12G20570 I
BGIOSGA000770 Oryza indica BGIOSGA000770 I
PCF5 Oryza indica BGIOSGA002128 I
PCF6 Oryza indica BGIOSGA013684 I
BGIOSGA020173 Oryza indica BGIOSGA020173 I
PCF8 Oryza indica BGIOSGA037799 I
OLONG_003082 Oryza longistaminata OLONG_003082 I
OMERI01G07200 Oryza meridionalis OMERI01G07200 I
OMERI01G28950 Oryza meridionalis OMERI01G28950 I
OMERI03G33790 Oryza meridionalis OMERI03G33790 I
OMERI05G20240 Oryza meridionalis OMERI05G20240 I
OMERI12G13760 Oryza meridionalis OMERI12G13760 I
ONIVA01G09270 Oryza nivara ONIVA01G09270 I
ONIVA01G36230 Oryza nivara ONIVA01G36230 I
ONIVA03G37780 Oryza nivara ONIVA03G37780 I
ONIVA05G23460 Oryza nivara ONIVA05G23460 I
ONIVA12G17870 Oryza nivara ONIVA12G17870 I
OPUNC01G06940 Oryza punctata OPUNC01G06940 I
OPUNC01G30950 Oryza punctata OPUNC01G30950 I
OPUNC05G20130 Oryza punctata OPUNC05G20130 I
OPUNC07G03260 Oryza punctata OPUNC07G03260 I
OPUNC12G17090 Oryza punctata OPUNC12G17090 I
ORUFI01G07780 Oryza rufipogon ORUFI01G07780 I
ORUFI01G35100 Oryza rufipogon ORUFI01G35100 I
ORUFI03G38070 Oryza rufipogon ORUFI03G38070 I
ORUFI05G23910 Oryza rufipogon ORUFI05G23910 I
OS01G0213800 Oryza sativa OS01G0213800 D
OS01G0763200 Oryza sativa OS01G0763200 I
PCF6 Oryza sativa OS03G0785800 I
OS05G0513100 Oryza sativa OS05G0513100 I
Pavir.Ba03864 Panicum virgatum Pavir.Ba03864 I
Pavir.Ca01337 Panicum virgatum Pavir.Ca01337 I
Pavir.Ca02949 Panicum virgatum Pavir.Ca02949 I
Pavir.Cb00038 Panicum virgatum Pavir.Cb00038 I
Pavir.Ea02793 Panicum virgatum Pavir.Ea02793 I
Pavir.J03475 Panicum virgatum Pavir.J03475 I
Pavir.J15913 Panicum virgatum Pavir.J15913 I
Pavir.J24681 Panicum virgatum Pavir.J24681 I
Pavir.J35609 Panicum virgatum Pavir.J35609 I
Pavir.J36433 Panicum virgatum Pavir.J36433 I
Pavir.J37910 Panicum virgatum Pavir.J37910 I
PDK_20s1781021g001 Phoenix dactylifera PDK_20s1781021g001 I
PDK_20s1781021g002 Phoenix dactylifera PDK_20s1781021g002 I
XM_002300382.1 Populus trichocarpa POPTR_0001s38480 I
POPTR_0004s06440 Populus trichocarpa POPTR_0004s06440 I
POPTR_0004s11510 Populus trichocarpa POPTR_0004s11510 I
POPTR_0011s02350 Populus trichocarpa POPTR_0011s02350 I
POPTR_0015s06980 Populus trichocarpa POPTR_0015s06980 I
POPTR_0017s13050 Populus trichocarpa POPTR_0017s13050 I
Pm010440 Prunus mume Pm010440 I
Pm016049 Prunus mume Pm016049 I
Pm024946 Prunus mume Pm024946 I
PRUPE_ppa004612mg Prunus persica PRUPE_ppa004612mg I
PRUPE_ppa007243mg Prunus persica PRUPE_ppa007243mg I
PRUPE_ppa014630mg Prunus persica PRUPE_ppa014630mg I
29693.m001968 Ricinus communis 29693.m001968 I
29905.m000443 Ricinus communis 29905.m000443 I
30138.m003959 Ricinus communis 30138.m003959 I
SapurV1A.0232s0150 Salix purpurea SapurV1A.0232s0150 I
SapurV1A.0323s0010 Salix purpurea SapurV1A.0323s0010 I
SapurV1A.0546s0080 Salix purpurea SapurV1A.0546s0080 I
SapurV1A.0795s0080 Salix purpurea SapurV1A.0795s0080 I
SapurV1A.0901s0090 Salix purpurea SapurV1A.0901s0090 I
SapurV1A.0971s0180 Salix purpurea SapurV1A.0971s0180 I
SapurV1A.1394s0060 Salix purpurea SapurV1A.1394s0060 I
SapurV1A.2245s0020 Salix purpurea SapurV1A.2245s0020 I
SapurV1A.4442s0010 Salix purpurea SapurV1A.4442s0010 I
SapurV1A.4443s0010 Salix purpurea SapurV1A.4443s0010 I
Si002496m.g Setaria italica Si002496m.g I
Si004564m.g Setaria italica Si004564m.g I
Si019114m.g Setaria italica Si019114m.g I
Si022811m.g Setaria italica Si022811m.g I
Si022833m.g Setaria italica Si022833m.g I
Si036075m.g Setaria italica Si036075m.g I
Solyc02g065800.1 Solanum lycopersicum Solyc02g065800.1 I
Solyc02g089020.1 Solanum lycopersicum Solyc02g089020.1 I
Solyc03g115010.1 Solanum lycopersicum Solyc03g115010.1 I
Solyc06g069460.1 Solanum lycopersicum Solyc06g069460.1 I
Solyc08g048370.2 Solanum lycopersicum Solyc08g048370.2 I
Solyc08g048390.1 Solanum lycopersicum Solyc08g048390.1 I
PGSC0003DMG400001362 Solanum tuberosum PGSC0003DMG400001362 I
PGSC0003DMG400004082 Solanum tuberosum PGSC0003DMG400004082 I
PGSC0003DMG400019904 Solanum tuberosum PGSC0003DMG400019904 I
PGSC0003DMG400024632 Solanum tuberosum PGSC0003DMG400024632 I
PGSC0003DMG400026568 Solanum tuberosum PGSC0003DMG400026568 I
Sb02g003070 Sorghum bicolor Sb02g003070 I
Sb03g001940 Sorghum bicolor Sb03g001940 I
Sb03g035350 Sorghum bicolor Sb03g035350 I
Sb08g021690 Sorghum bicolor Sb08g021690 I
Sb09g025340 Sorghum bicolor Sb09g025340 I
TCM_003652 Theobroma cacao TCM_003652 I
TCM_014288 Theobroma cacao TCM_014288 I
TCM_018809 Theobroma cacao TCM_018809 I
TCM_029442 Theobroma cacao TCM_029442 I
Traes_1AL_79B8C6F15 Triticum aestivum Traes_1AL_79B8C6F15 I
Traes_2AL_EA60A06AC Triticum aestivum Traes_2AL_EA60A06AC I
Traes_2BL_36A3AB3A2 Triticum aestivum Traes_2BL_36A3AB3A2 I
TRAES3BF002700090CFD_g Triticum aestivum TRAES3BF002700090CFD_g I
TRAES3BF014900010CFD_g Triticum aestivum TRAES3BF014900010CFD_g I
Traes_5BL_2DDBAA0C2 Triticum aestivum Traes_5BL_2DDBAA0C2 I
Traes_5BS_77558D2A3 Triticum aestivum Traes_5BS_77558D2A3 I
Traes_5DS_643EDFE5B Triticum aestivum Traes_5DS_643EDFE5B I
TCP2 Vitis vinifera VIT_10s0003g03910 I
PTF1 Vitis vinifera VIT_14s0068g00330 I
AC205574.3_FG006 Zea mays AC205574.3_FG006 I
GRMZM2G020805 Zea mays GRMZM2G020805 I
GRMZM2G035944 Zea mays GRMZM2G035944 I
GRMZM2G089361 Zea mays GRMZM2G089361 I
GRMZM2G120151 Zea mays GRMZM2G120151 I
GRMZM2G166946 Zea mays GRMZM2G166946 I
GRMZM2G180568 Zea mays GRMZM2G180568 I