TRV_05239 (Trichophyton verrucosum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 TRV_05239 T015744_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU01238
M01669_2.00 		Neurospora crassa
NYATNNNN
NNNNATRN		 PBM
Weirauch et al.(2014)
pTH8942 		0.653 0.816
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFE40023 ARID/BRIGHT 149 236

Links

Other ARID/BRIGHT family TFs
Other Trichophyton verrucosum TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00106p00065610 Amborella trichopoda AMTR_s00106p00065610 N
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I
fgenesh2_kg.6__825__AT5G08520.1 Arabidopsis lyrata fgenesh2_kg.6__825__AT5G08520.1 I
SRM1 Arabidopsis thaliana AT5G08520 D
Bostr.13129s0103 Boechera stricta Bostr.13129s0103 I
Bo9g174380 Brassica oleracea Bo9g174380 I
PK13672.1 Cannabis sativa PK13672.1 I
Cagra.1365s0066 Capsella grandiflora Cagra.1365s0066 I
Carubv10001525m.g Capsella rubella Carubv10001525m.g I
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I
Ca_19000 Cicer arietinum Ca_19000 I
Ca_14522 Cicer arietinum Ca_14522 N
Ca_05454 Cicer arietinum Ca_05454 I
Cla020348 Citrullus lanatus Cla020348 I
Cla009230 Citrullus lanatus Cla009230 I
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I
Cucsa.280970 Cucumis sativus Cucsa.280970 I
Cucsa.013870 Cucumis sativus Cucsa.013870 I
Eucgr.J00349 Eucalyptus grandis Eucgr.J00349 N
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I
Thhalv10014203m.g Eutrema salsugineum Thhalv10014203m.g I
gene00786-v1.0-hybrid Fragaria vesca gene00786-v1.0-hybrid N
GLYMA08G40020 Glycine max GLYMA08G40020 I
GLYMA10G42450 Glycine max GLYMA10G42450 I
GLYMA18G18140 Glycine max GLYMA18G18140 I
GLYMA20G01450 Glycine max GLYMA20G01450 I
GLYMA07G28310 Glycine max GLYMA07G28310 I
GLYMA20G24600 Glycine max GLYMA20G24600 I
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I
Gorai.006G063000 Gossypium raimondii Gorai.006G063000 I
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I
Lus10013447.g Linum usitatissimum Lus10013447.g I
Lus10041001.g Linum usitatissimum Lus10041001.g N
MDP0000289018 Malus domestica MDP0000289018 I
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I
MTR_1g111830 Medicago truncatula MTR_1g111830 I
MTR_8g063600 Medicago truncatula MTR_8g063600 N
mgf009460m Mimulus guttatus mgf009460m I
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I
GSMUA_Achr10G06880_001 Musa acuminata GSMUA_Achr10G06880_001 N
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I
OB04G36550 Oryza brachyantha OB04G36550 N
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N
gw1.13.182.1 Physcomitrella patens gw1.13.182.1 N
e_gw1.256.18.1 Physcomitrella patens e_gw1.256.18.1 N
Pm006046 Prunus mume Pm006046 I
Pm017050 Prunus mume Pm017050 I
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I
PRUPE_ppa010926mg Prunus persica PRUPE_ppa010926mg I
30131.m007263 Ricinus communis 30131.m007263 I
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I
Si022762m.g Setaria italica Si022762m.g N
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I
Sb06g032880 Sorghum bicolor Sb06g032880 N
TCM_007672 Theobroma cacao TCM_007672 I
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I
GRMZM2G149958 Zea mays GRMZM2G149958 I