OBART12G08540 (Oryza barthii)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 OBART12G08540 T027072_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART12G08540.1 BED ZF 268 310

Links

Other BED ZF family TFs
Other Oryza barthii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac016 Arabidopsis lyrata fgenesh2_kg.1__3525__AT1G34180.1 I
anac017 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003048 I
NAC017 Arabidopsis thaliana AT1G34190 D
anac016 Arabidopsis thaliana AT1G34180 D
Bostr.1040s0051 Boechera stricta Bostr.1040s0051 I
Bostr.1040s0050 Boechera stricta Bostr.1040s0050 I
Bo6g044390 Brassica oleracea Bo6g044390 I
Bo5g085430 Brassica oleracea Bo5g085430 I
Bo8g027120 Brassica oleracea Bo8g027120 I
Bo5g085440 Brassica oleracea Bo5g085440 I
Bra034439 Brassica rapa Bra034439 I
Bra036744 Brassica rapa Bra036744 I
Bra034436 Brassica rapa Bra034436 I
Bra028039 Brassica rapa Bra028039 I
Cagra.3375s0004 Capsella grandiflora Cagra.3375s0004 I
Cagra.3375s0006 Capsella grandiflora Cagra.3375s0006 I
Carubv10008706m.g Capsella rubella Carubv10008706m.g I
Thhalv10007196m.g Eutrema salsugineum Thhalv10007196m.g I
Thhalv10007221m.g Eutrema salsugineum Thhalv10007221m.g I
cassava19069.valid.m1 Manihot esculenta cassava19069.valid.m1 I