cassava19069.valid.m1 (Manihot esculenta)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 cassava19069.valid.m1 T296844_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac016
M07172_2.00 		Arabidopsis thaliana
DVCKTGNBNNNCAMG
CKTGNNNVNCAMGBH		 Dap-seq
OMalley et al.(2016)
ANAC016_col_a 		0.876 0.816
anac016
M07173_2.00 		Arabidopsis thaliana
TVCKTGNBNNNCAMG
CKTGNNNVNCAMGBA		 Dap-seq
OMalley et al.(2016)
ANAC016_colamp_a 		0.876 0.816
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19069.valid.m1 NAC/NAM 20 146

Links

Other NAC/NAM family TFs
Other Manihot esculenta TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10000612m.g Citrus clementina Ciclev10000612m.g I 0.931
evm.TU.supercontig_26.135 Carica papaya evm.TU.supercontig_26.135 I 0.930
Lus10028713.g Linum usitatissimum Lus10028713.g I 0.909
cassava22173.valid.m1 Manihot esculenta cassava22173.valid.m1 I 0.902
gene27539-v1.0-hybrid Fragaria vesca gene27539-v1.0-hybrid N 0.901
MDP0000852271 Malus domestica MDP0000852271 I 0.901
PRUPE_ppa003410mg Prunus persica PRUPE_ppa003410mg N 0.900
Pm022358 Prunus mume Pm022358 N 0.900
GLYMA10G36360 Glycine max GLYMA10G36360 N 0.898
GLYMA20G31210 Glycine max GLYMA20G31210 N 0.898
Gorai.005G076200 Gossypium raimondii Gorai.005G076200 I 0.893
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I 0.893
Eucgr.F02771 Eucalyptus grandis Eucgr.F02771 N 0.891
Bra028039 Brassica rapa Bra028039 I 0.889
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.887
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.886
TCM_036587 Theobroma cacao TCM_036587 I 0.886
anac016 Arabidopsis lyrata fgenesh2_kg.1__3525__AT1G34180.1 I 0.885
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.884
Ca_04337 Cicer arietinum Ca_04337 N 0.883
Cla013854 Citrullus lanatus Cla013854 I 0.882
anac016 Arabidopsis thaliana AT1G34180 D 0.880
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.879
Carubv10008706m.g Capsella rubella Carubv10008706m.g I 0.874
Cagra.3375s0006 Capsella grandiflora Cagra.3375s0006 I 0.874
Cagra.3375s0004 Capsella grandiflora Cagra.3375s0004 I 0.872
anac017 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003048 I 0.872
Carubv10008761m.g Capsella rubella Carubv10008761m.g I 0.872