CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CH063_06329
(
Colletotrichum higginsianum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
CH063_06329
T032159_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01298
M01112_2.00
Aspergillus nidulans
BCACGTGAYN
NRTCACGTGV
PBM
Lambert et al.(2019)
pEX0385
0.856
0.907
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF34306
bHLH
299
406
RRESHNLVERRRRDNINERIQDLSRLVPAHRLEDEKIRKMIQNGTPLSPTLSGISNPSQATSGLAGPGARRAAGATGNITTGLPIEDKDKGPNKGDILNGAVSWTRDL
Links
Other
bHLH
family TFs
Other
Colletotrichum higginsianum
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_01928
Aegilops tauschii
F775_01928
I
0.000
AMTR_s00024p00159910
Amborella trichopoda
AMTR_s00024p00159910
I
0.000
Aquca_014_00855
Aquilegia coerulea
Aquca_014_00855
I
0.000
fgenesh2_kg.4__2350__AT2G42040.1
Arabidopsis lyrata
fgenesh2_kg.4__2350__AT2G42040.1
I
0.000
AT2G42040
Arabidopsis thaliana
AT2G42040
D
0.000
Bostr.25993s0574
Boechera stricta
Bostr.25993s0574
I
0.000
BRADI1G46270
Brachypodium distachyon
BRADI1G46270
I
0.000
Bo3g035920
Brassica oleracea
Bo3g035920
I
0.000
Bo4g014690
Brassica oleracea
Bo4g014690
I
0.000
Bo4g191280
Brassica oleracea
Bo4g191280
I
0.000
Bra000251
Brassica rapa
Bra000251
I
0.000
Bra004667
Brassica rapa
Bra004667
I
0.000
Bra016897
Brassica rapa
Bra016897
I
0.000
PK26699.1
Cannabis sativa
PK26699.1
I
0.000
Cagra.13389s0020
Capsella grandiflora
Cagra.13389s0020
I
0.000
Carubv10023878m.g
Capsella rubella
Carubv10023878m.g
I
0.000
evm.TU.supercontig_85.54
Carica papaya
evm.TU.supercontig_85.54
I
0.000
Ca_07320
Cicer arietinum
Ca_07320
I
0.000
Ciclev10012160m.g
Citrus clementina
Ciclev10012160m.g
I
0.000
orange1.1g019760m.g
Citrus sinensis
orange1.1g019760m.g
I
0.000
Cucsa.242590
Cucumis sativus
Cucsa.242590
I
0.000
Eucgr.A02456
Eucalyptus grandis
Eucgr.A02456
I
0.000
Thhalv10017052m.g
Eutrema salsugineum
Thhalv10017052m.g
I
0.000
gene00456-v1.0-hybrid
Fragaria vesca
gene00456-v1.0-hybrid
I
0.000
GLYMA19G33070
Glycine max
GLYMA19G33070
I
0.000
GLYMA02G28962
Glycine max
GLYMA02G28962
I
0.000
GLYMA03G30170
Glycine max
GLYMA03G30170
I
0.000
GLYMA09G16841
Glycine max
GLYMA09G16841
I
0.000
Gorai.002G156300
Gossypium raimondii
Gorai.002G156300
I
0.000
Gorai.012G100300
Gossypium raimondii
Gorai.012G100300
I
0.000
MLOC_17575
Hordeum vulgare
MLOC_17575
I
0.000
LPERR06G06210
Leersia perrieri
LPERR06G06210
I
0.000
Lus10004164.g
Linum usitatissimum
Lus10004164.g
I
0.000
Lus10021062.g
Linum usitatissimum
Lus10021062.g
I
0.000
LjT35F01.80.nd
Lotus japonicus
LjT35F01.80.nd
I
0.000
MDP0000121493
Malus domestica
MDP0000121493
I
0.000
MDP0000154434
Malus domestica
MDP0000154434
I
0.000
cassava31648.valid.m1
Manihot esculenta
cassava31648.valid.m1
I
0.000
cassava36463.valid.m1
Manihot esculenta
cassava36463.valid.m1
I
0.000
cassava36464.valid.m1
Manihot esculenta
cassava36464.valid.m1
I
0.000
MTR_1g054175
Medicago truncatula
MTR_1g054175
I
0.000
MTR_7g093350
Medicago truncatula
MTR_7g093350
I
0.000
MTR_7g093360
Medicago truncatula
MTR_7g093360
I
0.000
mgf007626m
Mimulus guttatus
mgf007626m
I
0.000
GSMUA_Achr10G29530_001
Musa acuminata
GSMUA_Achr10G29530_001
I
0.000
GSMUA_Achr3G07730_001
Musa acuminata
GSMUA_Achr3G07730_001
I
0.000
GSMUA_Achr3G20210_001
Musa acuminata
GSMUA_Achr3G20210_001
I
0.000
GSMUA_Achr7G18600_001
Musa acuminata
GSMUA_Achr7G18600_001
I
0.000
GSMUA_Achr9G15730_001
Musa acuminata
GSMUA_Achr9G15730_001
I
0.000
OBART06G06800
Oryza barthii
OBART06G06800
I
0.000
OB06G16230
Oryza brachyantha
OB06G16230
I
0.000
ORGLA06G0063300
Oryza glaberrima
ORGLA06G0063300
I
0.000
ORGLA02G0296600
Oryza glaberrima
ORGLA02G0296600
I
0.000
OGLUM06G07170
Oryza glumaepatula
OGLUM06G07170
I
0.000
OGLUM02G35430
Oryza glumaepatula
OGLUM02G35430
I
0.000
BGIOSGA022518
Oryza indica
BGIOSGA022518
I
0.000
BGIOSGA005516
Oryza indica
BGIOSGA005516
I
0.000
OMERI02G32570
Oryza meridionalis
OMERI02G32570
I
0.000
OMERI06G07980
Oryza meridionalis
OMERI06G07980
I
0.000
ONIVA02G36360
Oryza nivara
ONIVA02G36360
I
0.000
ONIVA06G08110
Oryza nivara
ONIVA06G08110
I
0.000
OPUNC02G31650
Oryza punctata
OPUNC02G31650
I
0.000
OPUNC06G06450
Oryza punctata
OPUNC06G06450
I
0.000
ORUFI06G07050
Oryza rufipogon
ORUFI06G07050
I
0.000
ORUFI02G35820
Oryza rufipogon
ORUFI02G35820
I
0.000
OS02G0773600
Oryza sativa
OS02G0773600
I
0.000
OS06G0207600
Oryza sativa
OS06G0207600
I
0.000
Pavir.Aa00328
Panicum virgatum
Pavir.Aa00328
N
0.000
Pavir.J07916
Panicum virgatum
Pavir.J07916
N
0.000
Pavir.J23833
Panicum virgatum
Pavir.J23833
I
0.000
Pavir.J25248
Panicum virgatum
Pavir.J25248
I
0.000
PDK_20s1436981g002
Phoenix dactylifera
PDK_20s1436981g002
I
0.000
POPTR_0006s20770
Populus trichocarpa
POPTR_0006s20770
I
0.000
POPTR_0006s20790
Populus trichocarpa
POPTR_0006s20790
I
0.000
POPTR_0016s05840
Populus trichocarpa
POPTR_0016s05840
I
0.000
POPTR_0016s05850
Populus trichocarpa
POPTR_0016s05850
I
0.000
Pm025936
Prunus mume
Pm025936
I
0.000
PRUPE_ppa016277mg
Prunus persica
PRUPE_ppa016277mg
I
0.000
29613.m000377
Ricinus communis
29613.m000377
I
0.000
29613.m000379
Ricinus communis
29613.m000379
I
0.000
SapurV1A.3188s0010
Salix purpurea
SapurV1A.3188s0010
I
0.000
SapurV1A.0854s0100
Salix purpurea
SapurV1A.0854s0100
I
0.000
SapurV1A.0854s0090
Salix purpurea
SapurV1A.0854s0090
I
0.000
SapurV1A.0251s0220
Salix purpurea
SapurV1A.0251s0220
I
0.000
SapurV1A.0251s0230
Salix purpurea
SapurV1A.0251s0230
I
0.000
Si019733m.g
Setaria italica
Si019733m.g
N
0.000
Solyc10g080530.1
Solanum lycopersicum
Solyc10g080530.1
I
0.000
PGSC0003DMG400023669
Solanum tuberosum
PGSC0003DMG400023669
I
0.000
Sb10g006810
Sorghum bicolor
Sb10g006810
I
0.000
Sb04g034665
Sorghum bicolor
Sb04g034665
N
0.000
TCM_024932
Theobroma cacao
TCM_024932
I
0.000
VIT_08s0007g06690
Vitis vinifera
VIT_08s0007g06690
I
0.000
VIT_08s0007g06640
Vitis vinifera
VIT_08s0007g06640
I
0.000
GRMZM2G165991
Zea mays
GRMZM2G165991
I
0.000
GRMZM2G134552
Zea mays
GRMZM2G134552
N
0.000
GRMZM2G033915
Zea mays
GRMZM2G033915
I
0.000