CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GB46056
(
Apis mellifera
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GB46056
T039372_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAND2
M04150_2.00
Homo sapiens
MACACCTGBD
HVCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_HT-SELEX
0.883
0.865
HAND2
M04151_2.00
Homo sapiens
MACACCTGYD
HRCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_Methyl-HT-SELEX
0.883
0.865
Hand
M05984_2.00
Drosophila melanogaster
CASATGGCS
SGCCATSTG
B1H
Zhu et al.(2011)
Hand_da_SANGER_5_FBgn0032209
0.851
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GB46056-PA
bHLH
158
210
RRNTANKKERRRTQSINNAFADLRDCIPNVPADTKLSKIKTLRLAASYIGYLM
Links
Other
bHLH
family TFs
Other
Apis mellifera
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_020_00179
Aquilegia coerulea
Aquca_020_00179
N
Aquca_001_00551
Aquilegia coerulea
Aquca_001_00551
N
Bo3g083280
Brassica oleracea
Bo3g083280
N
Bra001951
Brassica rapa
Bra001951
N
PK03816.1
Cannabis sativa
PK03816.1
N
evm.TU.supercontig_181.13
Carica papaya
evm.TU.supercontig_181.13
N
Ca_12978
Cicer arietinum
Ca_12978
N
Cla015679
Citrullus lanatus
Cla015679
N
Ciclev10025757m.g
Citrus clementina
Ciclev10025757m.g
N
Ciclev10008866m.g
Citrus clementina
Ciclev10008866m.g
N
orange1.1g048259m.g
Citrus sinensis
orange1.1g048259m.g
N
orange1.1g019823m.g
Citrus sinensis
orange1.1g019823m.g
N
Cucsa.358990
Cucumis sativus
Cucsa.358990
N
Eucgr.J02994
Eucalyptus grandis
Eucgr.J02994
N
gene05956-v1.0-hybrid
Fragaria vesca
gene05956-v1.0-hybrid
N
gene02091-v1.0-hybrid
Fragaria vesca
gene02091-v1.0-hybrid
N
GLYMA15G01730
Glycine max
GLYMA15G01730
N
GLYMA13G43651
Glycine max
GLYMA13G43651
N
Gorai.006G098600
Gossypium raimondii
Gorai.006G098600
N
Gorai.009G133300
Gossypium raimondii
Gorai.009G133300
N
Gorai.010G228000
Gossypium raimondii
Gorai.010G228000
N
Lus10035893.g
Linum usitatissimum
Lus10035893.g
N
Lus10025772.g
Linum usitatissimum
Lus10025772.g
N
MDP0000500940
Malus domestica
MDP0000500940
N
MDP0000276691
Malus domestica
MDP0000276691
N
cassava1476.valid.m1
Manihot esculenta
cassava1476.valid.m1
N
MTR_2g102227
Medicago truncatula
MTR_2g102227
N
MTR_6g486270
Medicago truncatula
MTR_6g486270
N
mgf024433m
Mimulus guttatus
mgf024433m
N
POPTR_0001s18000
Populus trichocarpa
POPTR_0001s18000
N
POPTR_0003s05470
Populus trichocarpa
POPTR_0003s05470
N
Pm027397
Prunus mume
Pm027397
N
Pm013502
Prunus mume
Pm013502
N
29872.m000548
Ricinus communis
29872.m000548
N
SapurV1A.0002s0250
Salix purpurea
SapurV1A.0002s0250
N
SapurV1A.1168s0060
Salix purpurea
SapurV1A.1168s0060
N
SapurV1A.3798s0010
Salix purpurea
SapurV1A.3798s0010
N
Solyc05g018350.2
Solanum lycopersicum
Solyc05g018350.2
N
Solyc12g043090.1
Solanum lycopersicum
Solyc12g043090.1
N
PGSC0003DMG400031382
Solanum tuberosum
PGSC0003DMG400031382
N
PGSC0003DMG400027438
Solanum tuberosum
PGSC0003DMG400027438
N
TCM_028688
Theobroma cacao
TCM_028688
N
VIT_09s0002g04700
Vitis vinifera
VIT_09s0002g04700
N
VIT_11s0016g04130
Vitis vinifera
VIT_11s0016g04130
N