ISCW019706 (Ixodes scapularis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ISCW019706 T040555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.851 0.885
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.851 0.885
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.851 0.885
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.851 0.885
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.851 0.885
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.851 0.885
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.851 0.885
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.851 0.885
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.851 0.885
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.851 0.885
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.851 0.865
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.851 0.865
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.851 0.865
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.851 0.865
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.851 0.865
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.851 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ISCW019706-PA bHLH 32 84

Links

Other bHLH family TFs
Other Ixodes scapularis TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00064p00208400 Amborella trichopoda AMTR_s00064p00208400 I
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I
AT5G56960 Arabidopsis thaliana AT5G56960 I
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I
Bra035639 Brassica rapa Bra035639 I
PK15505.1 Cannabis sativa PK15505.1 D
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I
Carubv10026331m.g Capsella rubella Carubv10026331m.g I
Cla017100 Citrullus lanatus Cla017100 I
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I
Cucsa.117060 Cucumis sativus Cucsa.117060 I
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I
Thhalv10013360m.g Eutrema salsugineum Thhalv10013360m.g I
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I
LPERR05G05410 Leersia perrieri LPERR05G05410 I
Lus10017152.g Linum usitatissimum Lus10017152.g N
MDP0000119495 Malus domestica MDP0000119495 I
MDP0000782908 Malus domestica MDP0000782908 I
MDP0000252899 Malus domestica MDP0000252899 I
cassava46879.m1 Manihot esculenta cassava46879.m1 I
cassava25701.m1 Manihot esculenta cassava25701.m1 I
mgf018190m Mimulus guttatus mgf018190m I
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I
OBART05G06380 Oryza barthii OBART05G06380 I
OB05G15870 Oryza brachyantha OB05G15870 I
ORGLA05G0058200 Oryza glaberrima ORGLA05G0058200 I
OGLUM01G06710 Oryza glumaepatula OGLUM01G06710 N
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I
BGIOSGA033976 Oryza indica BGIOSGA033976 I
BGIOSGA002941 Oryza indica BGIOSGA002941 N
ONIVA01G07090 Oryza nivara ONIVA01G07090 N
ONIVA05G07120 Oryza nivara ONIVA05G07120 I
OPUNC05G05910 Oryza punctata OPUNC05G05910 I
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I
OS05G0199800 Oryza sativa OS05G0199800 I
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I
Pavir.J01638 Panicum virgatum Pavir.J01638 I
PDK_20s1427741g002 Phoenix dactylifera PDK_20s1427741g002 I
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I
Pm027191 Prunus mume Pm027191 I
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I
29912.m005337 Ricinus communis 29912.m005337 I
SapurV1A.0108s0270 Salix purpurea SapurV1A.0108s0270 I
Solyc07g039570.2 Solanum lycopersicum Solyc07g039570.2 I
PGSC0003DMG400022043 Solanum tuberosum PGSC0003DMG400022043 I
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I
Sb09g006196 Sorghum bicolor Sb09g006196 N
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I
GRMZM2G175480 Zea mays GRMZM2G175480 N
GRMZM2G132550 Zea mays GRMZM2G132550 N