PGSC0003DMG400019263 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400019263 T043477_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH34
M01704_2.00 		Arabidopsis thaliana
VCACGYGH
DCRCGTGB		 PBM
Weirauch et al.(2014)
pTH7212 		0.879 0.745
BHLH34
M06734_2.00 		Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN
NGDCACGTGBNNNNHNNDNNN		 Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a 		0.879 0.745
BHLH34
M06735_2.00 		Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN
NNNNNNNNVCACGTGNNNNNYWY		 Dap-seq
OMalley et al.(2016)
bHLH34_col 		0.879 0.745
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400049590 bHLH 76 126
PGSC0003DMT400049592 bHLH 76 126

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00009p00175450 Amborella trichopoda AMTR_s00009p00175450 I 0.864
Aquca_017_00706 Aquilegia coerulea Aquca_017_00706 N 0.842
bHLH34 Arabidopsis lyrata fgenesh2_kg.3__2536__AT3G23210.1 I 0.879
BHLH34 Arabidopsis thaliana AT3G23210 D 0.879
Cla019717 Citrullus lanatus Cla019717 N 0.842
Cucsa.086320 Cucumis sativus Cucsa.086320 N 0.868
Cucsa.086310 Cucumis sativus Cucsa.086310 N 0.868
Cucsa.086300 Cucumis sativus Cucsa.086300 N 0.868
Cucsa.086330 Cucumis sativus Cucsa.086330 N 0.868
Eucgr.K00871 Eucalyptus grandis Eucgr.K00871 N 0.856
Gorai.013G164100 Gossypium raimondii Gorai.013G164100 I 0.879
Gorai.011G172500 Gossypium raimondii Gorai.011G172500 I 0.843
Gorai.002G081900 Gossypium raimondii Gorai.002G081900 I 0.879
mgf012088m Mimulus guttatus mgf012088m I 0.868
mgf009119m Mimulus guttatus mgf009119m I 0.856
OB07G23510 Oryza brachyantha OB07G23510 N 0.839
Pavir.Ba00731 Panicum virgatum Pavir.Ba00731 N 0.839
Pavir.J35704 Panicum virgatum Pavir.J35704 N 0.839
POPTR_0011s03360 Populus trichocarpa POPTR_0011s03360 N 0.852
POPTR_0004s03190 Populus trichocarpa POPTR_0004s03190 N 0.852
29842.m003681 Ricinus communis 29842.m003681 N 0.860
SapurV1A.0028s0330 Salix purpurea SapurV1A.0028s0330 N 0.839
SapurV1A.0502s0080 Salix purpurea SapurV1A.0502s0080 N 0.852
SELMODRAFT_431241 Selaginella moellendorffii SELMODRAFT_431241 I 0.869
SELMODRAFT_405883 Selaginella moellendorffii SELMODRAFT_405883 I 0.869
Si030877m.g Setaria italica Si030877m.g N 0.839
Solyc10g006510.2 Solanum lycopersicum Solyc10g006510.2 I 0.870
Solyc07g064040.2 Solanum lycopersicum Solyc07g064040.2 I 0.879
Solyc02g079970.2 Solanum lycopersicum Solyc02g079970.2 N 0.844
PGSC0003DMG400021717 Solanum tuberosum PGSC0003DMG400021717 N 0.844
PGSC0003DMG400014432 Solanum tuberosum PGSC0003DMG400014432 I 0.864
Sb02g035580 Sorghum bicolor Sb02g035580 N 0.839
VIT_19s0014g05100 Vitis vinifera VIT_19s0014g05100 N 0.852
VIT_14s0081g00720 Vitis vinifera VIT_14s0081g00720 I 0.848