Ciclev10032356m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10032356m.g T049567_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK01630.1
M01118_2.00 		Cannabis sativa
GCACGTGD
HCACGTGC		 PBM
Lambert et al.(2019)
pTH11426 		0.914 0.898
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10032356m bHLH 82 130

Links

Other bHLH family TFs
Other Citrus clementina TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007755 Ailuropoda melanoleuca ENSAMEG00000007755 I
Alligator_sinensis_CCG020881.1 Alligator sinensis Alligator_sinensis_CCG020881.1 I
ZBTB42 Anolis carolinensis ENSACAG00000011451 I
Afo_R004692 Aptenodytes forsteri Afo_R004692 I
Brh_R011012 Buceros rhinoceros Brh_R011012 I
Aan_R011644 Calypte anna Aan_R011644 I
Cmyd_10012301 Chelonia mydas Cmyd_10012301 I
ENSCSAG00000019588 Chlorocebus sabaeus ENSCSAG00000019588 I
zbtb42 Danio rerio ENSDARG00000102761 I
ENSFALG00000014898 Ficedula albicollis ENSFALG00000014898 I
ZBTB42 Gallus gallus ENSGALG00000023025 I
zbtb42 Gasterosteus aculeatus ENSGACG00000006297 I
Gfo_R006792 Geospiza fortis Gfo_R006792 I
ZBTB42 Homo sapiens ENSG00000179627 D
ENSLOCG00000012759 Lepisosteus oculatus ENSLOCG00000012759 I
ENSP00000409107 Macaca fascicularis ENSP00000409107 I
ZBTB42 Monodelphis domestica ENSMODG00000013701 I
Ogr11588 Ophisaurus gracilis Ogr11588 I
ENSONIG00000012149 Oreochromis niloticus ENSONIG00000012149 I
zbtb42 Oryzias latipes ENSORLG00000017008 I
ZBTB42 Pan troglodytes ENSPTRG00000040287 I
ENSPSIG00000000487 Pelodiscus sinensis ENSPSIG00000000487 I
ENSPFOG00000010298 Poecilia formosa ENSPFOG00000010298 I
Pvit_02527 Pogona vitticeps Pvit_02527 I
ENSSHAG00000008534 Sarcophilus harrisii ENSSHAG00000008534 I
zbtb42 Takifugu rubripes ENSTRUG00000013592 I
zbtb42 Tetraodon nigroviridis ENSTNIG00000000917 I
znf238.2.L Xenopus laevis XB-GENE-1219070 I
znf238.2 Xenopus tropicalis XB-GENE-1219066 I
ENSXMAG00000006703 Xiphophorus maculatus ENSXMAG00000006703 I