arntl.L (Xenopus laevis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-17342306 T051777_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arntl
M01751_2.00 		Mus musculus
NCACGTGAYN
NRTCACGTGN		 PBM
Weirauch et al.(2014)
pTH5064 		0.914 1.000
ARNTL
M02787_2.00 		Homo sapiens
GTCACGTGAC
GTCACGTGAC		 SELEX
Jolma et al.(2013)
ARNTL_1 		0.914 1.000
ARNTL
M04124_2.00 		Homo sapiens
RDCACGTGHN
NDCACGTGHY		 SELEX
Yin et al.(2017)
ARNTL_eDBD_HT-SELEX 		0.914 1.000
ARNTL
M08725_2.00 		Homo sapiens
NVDCACGTGBN
NVCACGTGHBN		 Misc
Kulakovskiy et al.(2013)
BMAL1_HUMAN.H11MO.0.A 		0.914 1.000
Arntl
M08776_2.00 		Mus musculus
VCACGTGMN
NKCACGTGB		 Misc
Kulakovskiy et al.(2013)
BMAL1_MOUSE.H11MO.0.A 		0.914 1.000
Arntl
M09478_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Bmal1_GSE39860 		0.914 1.000
Arntl
M09889_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_01 		0.914 1.000
ARNTL
M09841_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BMAL1_Q6 		0.914 1.000
ARNTL
M04125_2.00 		Homo sapiens
NDCACRTGHY
RDCAYGTGHN		 SELEX
Yin et al.(2017)
ARNTL_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH77551 bHLH 78 131

Links

Other bHLH family TFs
Other Xenopus laevis TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_11081 Aegilops tauschii F775_11081 I 0.000
F775_20020 Aegilops tauschii F775_20020 I 0.000
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.000
AMTR_s00017p00119990 Amborella trichopoda AMTR_s00017p00119990 I 0.000
Aquca_006_00155 Aquilegia coerulea Aquca_006_00155 I 0.000
Aquca_007_00369 Aquilegia coerulea Aquca_007_00369 I 0.000
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.000
Aquca_023_00039 Aquilegia coerulea Aquca_023_00039 I 0.000
VND1 Arabidopsis lyrata Al_scaffold_0003_3772 I 0.000
VND7 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001196 I 0.000
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I 0.000
ANAC076 Arabidopsis lyrata fgenesh2_kg.7__450__AT4G36160.1 I 0.000
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I 0.000
NAC007 Arabidopsis thaliana AT1G12260 D 0.000
NAC030 Arabidopsis thaliana AT1G71930 D 0.000
NAC037 Arabidopsis thaliana AT2G18060 D 0.000
ANAC076 Arabidopsis thaliana AT4G36160 D 0.000
NAC105 Arabidopsis thaliana AT5G66300 D 0.000
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I 0.000
Bostr.10273s0160 Boechera stricta Bostr.10273s0160 I 0.000
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I 0.000
Bostr.18351s0273 Boechera stricta Bostr.18351s0273 I 0.000
Bostr.7867s1483 Boechera stricta Bostr.7867s1483 I 0.000
Bo1g005810 Brassica oleracea Bo1g005810 I 0.000
Bo2g075130 Brassica oleracea Bo2g075130 I 0.000
Bo3g093950 Brassica oleracea Bo3g093950 I 0.000
Bo5g017120 Brassica oleracea Bo5g017120 I 0.000
Bo6g114440 Brassica oleracea Bo6g114440 I 0.000
Bo7g011640 Brassica oleracea Bo7g011640 I 0.000
Bo7g065010 Brassica oleracea Bo7g065010 I 0.000
Bo7g117820 Brassica oleracea Bo7g117820 I 0.000
Bo8g062650 Brassica oleracea Bo8g062650 I 0.000
Bo8g108300 Brassica oleracea Bo8g108300 I 0.000
Bra007996 Brassica rapa Bra007996 I 0.000
Bra011667 Brassica rapa Bra011667 I 0.000
Bra012065 Brassica rapa Bra012065 I 0.000
Bra016098 Brassica rapa Bra016098 I 0.000
Bra016783 Brassica rapa Bra016783 I 0.000
Bra017750 Brassica rapa Bra017750 I 0.000
Bra019750 Brassica rapa Bra019750 I 0.000
Bra026981 Brassica rapa Bra026981 I 0.000
Bra039915 Brassica rapa Bra039915 I 0.000
PK11173.1 Cannabis sativa PK11173.1 I 0.000
PK23416.1 Cannabis sativa PK23416.1 I 0.000
PK28510.1 Cannabis sativa PK28510.1 I 0.000
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I 0.000
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I 0.000
Cagra.4006s0034 Capsella grandiflora Cagra.4006s0034 I 0.000
Cagra.4734s0006 Capsella grandiflora Cagra.4734s0006 I 0.000
Carubv10004997m.g Capsella rubella Carubv10004997m.g I 0.000
Carubv10009366m.g Capsella rubella Carubv10009366m.g I 0.000
Carubv10020645m.g Capsella rubella Carubv10020645m.g I 0.000
Carubv10026898m.g Capsella rubella Carubv10026898m.g I 0.000
evm.TU.contig_30558 Carica papaya evm.TU.contig_30558 I 0.000
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I 0.000
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I 0.000
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I 0.000
Ca_01981 Cicer arietinum Ca_01981 I 0.000
Ca_04309 Cicer arietinum Ca_04309 I 0.000
Cla006372 Citrullus lanatus Cla006372 I 0.000
Cla014492 Citrullus lanatus Cla014492 I 0.000
Cla016604 Citrullus lanatus Cla016604 I 0.000
Ciclev10003255m.g Citrus clementina Ciclev10003255m.g I 0.000
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.000
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I 0.000
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I 0.000
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.000
orange1.1g019821m.g Citrus sinensis orange1.1g019821m.g I 0.000
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I 0.000
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I 0.000
Cucsa.043420 Cucumis sativus Cucsa.043420 I 0.000
Cucsa.240650 Cucumis sativus Cucsa.240650 I 0.000
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.000
Cucsa.302120 Cucumis sativus Cucsa.302120 I 0.000
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.000
Eucgr.F02615 Eucalyptus grandis Eucgr.F02615 I 0.000
Eucgr.I02366 Eucalyptus grandis Eucgr.I02366 I 0.000
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I 0.000
Thhalv10018853m.g Eutrema salsugineum Thhalv10018853m.g I 0.000
Thhalv10022756m.g Eutrema salsugineum Thhalv10022756m.g I 0.000
Thhalv10025510m.g Eutrema salsugineum Thhalv10025510m.g I 0.000
gene14869-v1.0-hybrid Fragaria vesca gene14869-v1.0-hybrid I 0.000
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.000
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I 0.000
GLYMA01G37310 Glycine max GLYMA01G37310 I 0.000
GLYMA02G05620 Glycine max GLYMA02G05620 I 0.000
GLYMA04G13660 Glycine max GLYMA04G13660 I 0.000
GLYMA06G47680 Glycine max GLYMA06G47680 I 0.000
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.000
GLYMA10G36050 Glycine max GLYMA10G36050 I 0.000
GLYMA11G03340 Glycine max GLYMA11G03340 I 0.000
GLYMA11G07990 Glycine max GLYMA11G07990 I 0.000
GLYMA12G00760 Glycine max GLYMA12G00760 I 0.000
GLYMA16G24200 Glycine max GLYMA16G24200 I 0.000
GLYMA20G31551 Glycine max GLYMA20G31551 I 0.000
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.000
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I 0.000
Gorai.003G114100 Gossypium raimondii Gorai.003G114100 I 0.000
Gorai.007G196400 Gossypium raimondii Gorai.007G196400 I 0.000
Gorai.008G063600 Gossypium raimondii Gorai.008G063600 I 0.000
Gorai.008G236400 Gossypium raimondii Gorai.008G236400 I 0.000
Gorai.013G140700 Gossypium raimondii Gorai.013G140700 I 0.000
MLOC_56769 Hordeum vulgare MLOC_56769 I 0.000
MLOC_66924 Hordeum vulgare MLOC_66924 I 0.000
LPERR03G01990 Leersia perrieri LPERR03G01990 I 0.000
Lus10017915.g Linum usitatissimum Lus10017915.g I 0.000
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.000
Lus10028372.g Linum usitatissimum Lus10028372.g I 0.000
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.000
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.000
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.000
Lus10041822.g Linum usitatissimum Lus10041822.g I 0.000
LjSGA_075859.1 Lotus japonicus LjSGA_075859.1 I 0.000
MDP0000136180 Malus domestica MDP0000136180 I 0.000
MDP0000176447 Malus domestica MDP0000176447 I 0.000
MDP0000298965 Malus domestica MDP0000298965 I 0.000
MDP0000299959 Malus domestica MDP0000299959 I 0.000
MDP0000849944 Malus domestica MDP0000849944 I 0.000
MDP0000902822 Malus domestica MDP0000902822 I 0.000
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I 0.000
cassava25360.m1 Manihot esculenta cassava25360.m1 I 0.000
cassava26615.m1 Manihot esculenta cassava26615.m1 I 0.000
cassava40790.m1 Manihot esculenta cassava40790.m1 I 0.000
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.000
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.000
MTR_1g096430 Medicago truncatula MTR_1g096430 I 0.000
MTR_5g021710 Medicago truncatula MTR_5g021710 I 0.000
mgf009391m Mimulus guttatus mgf009391m I 0.000
mgf020336m Mimulus guttatus mgf020336m I 0.000
mgf021916m Mimulus guttatus mgf021916m I 0.000
mgf022574m Mimulus guttatus mgf022574m I 0.000
mgf026153m Mimulus guttatus mgf026153m I 0.000
GSMUA_Achr11G03040_001 Musa acuminata GSMUA_Achr11G03040_001 I 0.000
GSMUA_Achr8G12100_001 Musa acuminata GSMUA_Achr8G12100_001 I 0.000
OBART03G02180 Oryza barthii OBART03G02180 I 0.000
OBART10G16620 Oryza barthii OBART10G16620 I 0.000
OB03G12100 Oryza brachyantha OB03G12100 I 0.000
OB10G23740 Oryza brachyantha OB10G23740 I 0.000
ORGLA03G0019500 Oryza glaberrima ORGLA03G0019500 I 0.000
OGLUM03G02130 Oryza glumaepatula OGLUM03G02130 I 0.000
OGLUM10G16690 Oryza glumaepatula OGLUM10G16690 I 0.000
BGIOSGA011539 Oryza indica BGIOSGA011539 I 0.000
BGIOSGA033343 Oryza indica BGIOSGA033343 I 0.000
OLONG_011521 Oryza longistaminata OLONG_011521 I 0.000
OLONG_016152 Oryza longistaminata OLONG_016152 I 0.000
OMERI03G02020 Oryza meridionalis OMERI03G02020 I 0.000
OMERI10G13220 Oryza meridionalis OMERI10G13220 I 0.000
ONIVA03G01790 Oryza nivara ONIVA03G01790 I 0.000
ONIVA10G18400 Oryza nivara ONIVA10G18400 I 0.000
OPUNC03G01920 Oryza punctata OPUNC03G01920 I 0.000
OPUNC10G15070 Oryza punctata OPUNC10G15070 I 0.000
ORUFI03G01920 Oryza rufipogon ORUFI03G01920 I 0.000
ORUFI10G17730 Oryza rufipogon ORUFI10G17730 I 0.000
OS10G0532000 Oryza sativa OS10G0532000 I 0.000
Pavir.Ia02924 Panicum virgatum Pavir.Ia02924 I 0.000
Pavir.Ib00161 Panicum virgatum Pavir.Ib00161 I 0.000
Pavir.Ib02477 Panicum virgatum Pavir.Ib02477 I 0.000
Pavir.J20698 Panicum virgatum Pavir.J20698 I 0.000
Pavir.J21162 Panicum virgatum Pavir.J21162 I 0.000
Pavir.J32898 Panicum virgatum Pavir.J32898 I 0.000
PDK_20s1306451g001 Phoenix dactylifera PDK_20s1306451g001 I 0.000
PDK_20s1503311g001 Phoenix dactylifera PDK_20s1503311g001 I 0.000
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.000
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.000
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I 0.000
POPTR_0007s13910 Populus trichocarpa POPTR_0007s13910 I 0.000
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.000
POPTR_0013s11740 Populus trichocarpa POPTR_0013s11740 I 0.000
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.000
POPTR_0019s11330 Populus trichocarpa POPTR_0019s11330 I 0.000
Pm019488 Prunus mume Pm019488 I 0.000
Pm019490 Prunus mume Pm019490 I 0.000
Pm022184 Prunus mume Pm022184 I 0.000
Pm023559 Prunus mume Pm023559 I 0.000
Pm026735 Prunus mume Pm026735 I 0.000
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I 0.000
PRUPE_ppa016236mg Prunus persica PRUPE_ppa016236mg I 0.000
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.000
PRUPE_ppa022264mg Prunus persica PRUPE_ppa022264mg I 0.000
28200.m000189 Ricinus communis 28200.m000189 I 0.000
28623.m000400 Ricinus communis 28623.m000400 I 0.000
29728.m000815 Ricinus communis 29728.m000815 I 0.000
30147.m014211 Ricinus communis 30147.m014211 I 0.000
SapurV1A.0166s0460 Salix purpurea SapurV1A.0166s0460 I 0.000
SapurV1A.0179s0040 Salix purpurea SapurV1A.0179s0040 I 0.000
SapurV1A.0287s0280 Salix purpurea SapurV1A.0287s0280 I 0.000
SapurV1A.0287s0290 Salix purpurea SapurV1A.0287s0290 I 0.000
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I 0.000
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.000
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.000
SapurV1A.1801s0020 Salix purpurea SapurV1A.1801s0020 I 0.000
SapurV1A.2633s0010 Salix purpurea SapurV1A.2633s0010 I 0.000
SapurV1A.3982s0010 Salix purpurea SapurV1A.3982s0010 I 0.000
SELMODRAFT_100973 Selaginella moellendorffii SELMODRAFT_100973 I 0.000
SELMODRAFT_71405 Selaginella moellendorffii SELMODRAFT_71405 I 0.000
Si036363m.g Setaria italica Si036363m.g I 0.000
Si039467m.g Setaria italica Si039467m.g I 0.000
Solyc02g084350.2 Solanum lycopersicum Solyc02g084350.2 I 0.000
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.000
Solyc06g065410.2 Solanum lycopersicum Solyc06g065410.2 I 0.000
PGSC0003DMG400000887 Solanum tuberosum PGSC0003DMG400000887 I 0.000
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.000
PGSC0003DMG400026079 Solanum tuberosum PGSC0003DMG400026079 I 0.000
PGSC0003DMG401003552 Solanum tuberosum PGSC0003DMG401003552 I 0.000
Sb01g030760 Sorghum bicolor Sb01g030760 I 0.000
Sb01g048730 Sorghum bicolor Sb01g048730 I 0.000
Sb07g001550 Sorghum bicolor Sb07g001550 I 0.000
TCM_000235 Theobroma cacao TCM_000235 I 0.000
TCM_014939 Theobroma cacao TCM_014939 I 0.000
TCM_016035 Theobroma cacao TCM_016035 I 0.000
TCM_036364 Theobroma cacao TCM_036364 I 0.000
Traes_4BL_03B8EA3BF Triticum aestivum Traes_4BL_03B8EA3BF I 0.000
Traes_4DL_54E14ABCB Triticum aestivum Traes_4DL_54E14ABCB I 0.000
Traes_7AL_B000BC0DD Triticum aestivum Traes_7AL_B000BC0DD I 0.000
Traes_7DL_1AD9A3E8D Triticum aestivum Traes_7DL_1AD9A3E8D I 0.000
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.000
ANAC076 Vitis vinifera VIT_04s0023g03110 I 0.000
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.000
VND7 Vitis vinifera VIT_18s0072g01060 I 0.000
GRMZM2G025642 Zea mays GRMZM2G025642 I 0.000
GRMZM2G069047 Zea mays GRMZM2G069047 I 0.000
GRMZM2G092465 Zea mays GRMZM2G092465 I 0.000