LjT02N03.60.nd (Lotus japonicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 LjT02N03.60.nd T052165_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15505.1
M01125_2.00 		Cannabis sativa
NRCACGTGYN
NRCACGTGYN		 PBM
Lambert et al.(2019)
pTH10268 		0.854 0.735
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT02N03.60.nd bHLH 293 341

Links

Other bHLH family TFs
Other Lotus japonicus TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_020_00438 Aquilegia coerulea Aquca_020_00438 I 0.854
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I 0.854
AT5G56960 Arabidopsis thaliana AT5G56960 I 0.854
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I 0.854
Bo2g032920 Brassica oleracea Bo2g032920 I 0.866
Bra035639 Brassica rapa Bra035639 I 0.854
PK15505.1 Cannabis sativa PK15505.1 D 0.854
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I 0.854
Carubv10026331m.g Capsella rubella Carubv10026331m.g I 0.854
Ca_20616 Cicer arietinum Ca_20616 N 0.840
Cla017100 Citrullus lanatus Cla017100 I 0.876
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I 0.854
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.854
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.876
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.876
Thhalv10013360m.g Eutrema salsugineum Thhalv10013360m.g I 0.854
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I 0.876
GLYMA09G07391 Glycine max GLYMA09G07391 I 0.869
GLYMA15G18580 Glycine max GLYMA15G18580 I 0.869
GLYMA17G06190 Glycine max GLYMA17G06190 N 0.840
LPERR05G05410 Leersia perrieri LPERR05G05410 I 0.845
MDP0000119495 Malus domestica MDP0000119495 I 0.853
MDP0000252899 Malus domestica MDP0000252899 I 0.853
MDP0000782908 Malus domestica MDP0000782908 I 0.876
cassava25701.m1 Manihot esculenta cassava25701.m1 I 0.853
cassava46879.m1 Manihot esculenta cassava46879.m1 I 0.853
MTR_2g039620 Medicago truncatula MTR_2g039620 N 0.860
mgf018190m Mimulus guttatus mgf018190m I 0.842
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.854
OBART05G06380 Oryza barthii OBART05G06380 I 0.845
OB05G15870 Oryza brachyantha OB05G15870 I 0.845
ORGLA05G0058200 Oryza glaberrima ORGLA05G0058200 I 0.845
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I 0.845
BGIOSGA033976 Oryza indica BGIOSGA033976 I 0.845
ONIVA05G07120 Oryza nivara ONIVA05G07120 I 0.845
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.866
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I 0.845
OS05G0199800 Oryza sativa OS05G0199800 I 0.845
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.853
Pm027191 Prunus mume Pm027191 I 0.876
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I 0.876
29912.m005337 Ricinus communis 29912.m005337 I 0.853
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I 0.858
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.854