hic1l (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000004268 T095571_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIC2
M02902_2.00 		Homo sapiens
RTGCCMVNN
NNBKGGCAY		 SELEX
Jolma et al.(2013)
HIC2_1 		0.819 0.948
Hic1
M00141_2.00 		Mus musculus
RTGCCMNBN
NVNKGGCAY		 PBM
Badis et al.(2009)
Hic1_2816 		0.789 0.852
Hic1
M02933_2.00 		Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_1 		0.789 0.852
Hic1
M02934_2.00 		Mus musculus
RTGCCAVCN
NGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_2 		0.789 0.852
Hic1
M09003_2.00 		Mus musculus
KGGCAMCCH
DGGKTGCCM		 Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C 		0.789 0.852
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000005617 C2H2 ZF 425 447
ENSGACP00000005617 C2H2 ZF 489 511
ENSGACP00000005617 C2H2 ZF 517 539
ENSGACP00000005617 C2H2 ZF 545 567
ENSGACP00000005617 C2H2 ZF 573 595

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001482 Ailuropoda melanoleuca ENSAMEG00000001482 I
Alligator_sinensis_CCG010485.1 Alligator sinensis Alligator_sinensis_CCG010485.1 I
PRDM1 Callithrix jacchus ENSCJAG00000006332 I
PRDM1 Canis familiaris ENSCAFG00000003694 I
PRDM1 Cavia porcellus ENSCPOG00000014064 I
Cmyd_10006231 Chelonia mydas Cmyd_10006231 I
ENSCSAG00000014744 Chlorocebus sabaeus ENSCSAG00000014744 I
PRDM1 Echinops telfairi ENSETEG00000019669 I
PRDM1 Equus caballus ENSECAG00000009044 I
PRDM1 Erinaceus europaeus ENSEEUG00000013222 I
PRDM1 Felis catus ENSFCAG00000010755 I
PRDM1 Gorilla gorilla ENSGGOG00000001929 I
PRDM1 Homo sapiens ENSG00000057657 D
ENSSTOG00000016505 Ictidomys tridecemlineatus ENSSTOG00000016505 I
PRDM1 Loxodonta africana ENSLAFG00000013436 I
ENSP00000358092 Macaca fascicularis ENSP00000358092 I
PRDM1 Macaca mulatta ENSMMUG00000021401 I
ENSMEUG00000000043 Macropus eugenii ENSMEUG00000000043 I
PRDM1 Microcebus murinus ENSMICG00000010329 I
PRDM1 Monodelphis domestica ENSMODG00000018029 I
ENSMPUG00000009522 Mustela putorius furo ENSMPUG00000009522 I
Prdm1 Mus musculus ENSMUSG00000038151 D
Myotis_brandtii_PRDM1_10034696 Myotis brandtii Myotis_brandtii_PRDM1_10034696 I
PRDM1 Myotis lucifugus ENSMLUG00000014085 I
ENSNLEG00000013211 Nomascus leucogenys ENSNLEG00000013211 I
PRDM1 Ochotona princeps ENSOPRG00000006055 I
PRDM1 Ornithorhynchus anatinus ENSOANG00000004176 I
PRDM1 Oryctolagus cuniculus ENSOCUG00000015495 I
PRDM1 Otolemur garnettii ENSOGAG00000014036 I
PRDM1 Pan troglodytes ENSPTRG00000018457 I
ENSPANG00000016727 Papio anubis ENSPANG00000016727 I
ENSPSIG00000002661 Pelodiscus sinensis ENSPSIG00000002661 I
ENSPFOG00000018298 Poecilia formosa ENSPFOG00000018298 N
ENSPPYG00000016879 Pongo abelii ENSPPYG00000016879 I
PRDM1 Pteropus vampyrus ENSPVAG00000011732 I
Prdm1 Rattus norvegicus ENSRNOG00000000323 I
ENSSHAG00000010080 Sarcophilus harrisii ENSSHAG00000010080 I
PRDM1 Sorex araneus ENSSARG00000004079 I
PRDM1 Sus scrofa ENSSSCG00000004369 I
ENSTSYG00000011666 Tarsius syrichta ENSTSYG00000011666 I
PRDM1 Tupaia belangeri ENSTBEG00000004089 I
PRDM1 Tursiops truncatus ENSTTRG00000012894 I
ENSXMAG00000013351 Xiphophorus maculatus ENSXMAG00000013351 N