ENSGMOG00000016368 (Gadus morhua)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGMOG00000016368 T096878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.827 1.000
Osr1
M00144_2.00 		Mus musculus
NVCTHCYNN
NNRGDAGBN		 PBM
Badis et al.(2009)
Osr1_3033 		0.811 0.986
Osr1
M01174_2.00 		Mus musculus
GCTACYGT
ACRGTAGC		 PBM
Lambert et al.(2019)
pTH5339 		0.811 0.986
OSR1
M04477_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX 		0.811 0.986
OSR1
M04478_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX 		0.811 0.986
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.770 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000017551 C2H2 ZF 173 195
ENSGMOP00000017551 C2H2 ZF 201 223
ENSGMOP00000017551 C2H2 ZF 229 251

Links

Other C2H2 ZF family TFs
Other Gadus morhua TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_06135 Aegilops tauschii F775_06135 N
fgenesh2_kg.3__2134__AT3G19184.1 Arabidopsis lyrata fgenesh2_kg.3__2134__AT3G19184.1 N
AT3G19184 Arabidopsis thaliana AT3G19184 N
Bostr.19424s0744 Boechera stricta Bostr.19424s0744 N
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N
Bra035129 Brassica rapa Bra035129 N
PK25650.1 Cannabis sativa PK25650.1 N
Cagra.5742s0010 Capsella grandiflora Cagra.5742s0010 N
Carubv10014420m.g Capsella rubella Carubv10014420m.g N
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N
Cla016258 Citrullus lanatus Cla016258 N
Ciclev10029072m.g Citrus clementina Ciclev10029072m.g N
Ciclev10002314m.g Citrus clementina Ciclev10002314m.g N
orange1.1g036915m.g Citrus sinensis orange1.1g036915m.g N
orange1.1g026276m.g Citrus sinensis orange1.1g026276m.g N
Cucsa.219930 Cucumis sativus Cucsa.219930 N
Thhalv10019015m.g Eutrema salsugineum Thhalv10019015m.g N
Gorai.013G042700 Gossypium raimondii Gorai.013G042700 N
Gorai.002G131600 Gossypium raimondii Gorai.002G131600 N
LPERR06G05590 Leersia perrieri LPERR06G05590 N
Lus10014044.g Linum usitatissimum Lus10014044.g N
Lus10019870.g Linum usitatissimum Lus10019870.g N
mgf008645m Mimulus guttatus mgf008645m N
POPTR_0009s10590 Populus trichocarpa POPTR_0009s10590 N
PRUPE_ppb024440mg Prunus persica PRUPE_ppb024440mg N
29801.m003200 Ricinus communis 29801.m003200 N
SapurV1A.0090s0770 Salix purpurea SapurV1A.0090s0770 N
Solyc01g108140.2 Solanum lycopersicum Solyc01g108140.2 N
PGSC0003DMG400025792 Solanum tuberosum PGSC0003DMG400025792 N
Sb07g006170 Sorghum bicolor Sb07g006170 N
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N