ZSCAN9 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000017870 T108149_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN9
M04465_2.00 		Homo sapiens
NKGVTTCTTATCTTATCMYH
DRKGATAAGATAAGAABCMN		 SELEX
Yin et al.(2017)
ZSCAN9_eDBD_HT-SELEX 		0.825 0.983
ZSCAN9
M04466_2.00 		Homo sapiens
NKGVTTCTTATCTTATCCYY
RRGGATAAGATAAGAABCMN		 SELEX
Yin et al.(2017)
ZSCAN9_eDBD_Methyl-HT-SELEX 		0.825 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000030471 C2H2 ZF 254 276
ENSPTRP00000030471 C2H2 ZF 282 304
ENSPTRP00000030471 C2H2 ZF 310 332
ENSPTRP00000030471 C2H2 ZF 338 360
ENSPTRP00000030471 C2H2 ZF 366 388

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_25525 Aegilops tauschii F775_25525 I 0.000
F775_27799 Aegilops tauschii F775_27799 I 0.000
AEPI010254 Anopheles epiroticus AEPI010254 N 0.000
AMAM014030 Anopheles maculatus AMAM014030 N 0.000
AMIN005634 Anopheles minimus AMIN005634 N 0.000
ASIS014204 Anopheles sinensis ASIS014204 N 0.000
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.000
CRC Arabidopsis lyrata fgenesh2_kg.2__1172__AT1G69180.1 I 0.000
CRC Arabidopsis thaliana AT1G69180 D 0.000
BGLB013489 Biomphalaria glabrata BGLB013489 N 0.000
BGHDH14_bgh06194 Blumeria graminis BGHDH14_bgh06194 I 0.000
Bostr.10273s0455 Boechera stricta Bostr.10273s0455 I 0.000
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.000
BRADI3G30410 Brachypodium distachyon BRADI3G30410 I 0.000
BRADI3G50050 Brachypodium distachyon BRADI3G50050 I 0.000
BRADI5G16910 Brachypodium distachyon BRADI5G16910 I 0.000
Bo6g108630 Brassica oleracea Bo6g108630 I 0.000
Bra004364 Brassica rapa Bra004364 I 0.000
Cagra.0537s0004 Capsella grandiflora Cagra.0537s0004 I 0.000
Carubv10021641m.g Capsella rubella Carubv10021641m.g I 0.000
evm.TU.supercontig_145.3 Carica papaya evm.TU.supercontig_145.3 I 0.000
evm.TU.supercontig_29.121 Carica papaya evm.TU.supercontig_29.121 I 0.000
Ca_25981 Cicer arietinum Ca_25981 I 0.000
CLEC002888 Cimex lectularius CLEC002888 N 0.000
ENSCING00000000505 Ciona intestinalis ENSCING00000000505 I 0.000
Cla011745 Citrullus lanatus Cla011745 I 0.000
Ciclev10021834m.g Citrus clementina Ciclev10021834m.g I 0.000
Ciclev10022170m.g Citrus clementina Ciclev10022170m.g I 0.000
orange1.1g027215m.g Citrus sinensis orange1.1g027215m.g I 0.000
orange1.1g028144m.g Citrus sinensis orange1.1g028144m.g I 0.000
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.000
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.000
Cucsa.302100 Cucumis sativus Cucsa.302100 I 0.000
Cucsa.320600 Cucumis sativus Cucsa.320600 I 0.000
CpipJ_CPIJ003178 Culex pipiens CpipJ_CPIJ003178 N 0.000
CPIJ003178 Culex quinquefasciatus CPIJ003178 N 0.000
EMIHUDRAFT_434306 Emiliania huxleyi EMIHUDRAFT_434306 N 0.000
Eucgr.E01474 Eucalyptus grandis Eucgr.E01474 I 0.000
Thhalv10019126m.g Eutrema salsugineum Thhalv10019126m.g I 0.000
D915_12649 Fasciola hepatica D915_12649 N 0.000
gene32251-v1.0-hybrid Fragaria vesca gene32251-v1.0-hybrid I 0.000
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.000
GLYMA01G33370 Glycine max GLYMA01G33370 I 0.000
GLYMA03G03500 Glycine max GLYMA03G03500 I 0.000
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.000
GLYMA05G04260 Glycine max GLYMA05G04260 I 0.000
GLYMA17G14710 Glycine max GLYMA17G14710 I 0.000
Gorai.001G174800 Gossypium raimondii Gorai.001G174800 I 0.000
Gorai.008G236500 Gossypium raimondii Gorai.008G236500 I 0.000
Hsal_06265--XP_624018.2_APIME Harpegnathos saltator Hsal_06265--XP_624018.2_APIME N 0.000
MLOC_60897 Hordeum vulgare MLOC_60897 I 0.000
MLOC_70653 Hordeum vulgare MLOC_70653 I 0.000
ISCW008318 Ixodes scapularis ISCW008318 N 0.000
LPERR02G20990 Leersia perrieri LPERR02G20990 I 0.000
LPERR04G16190 Leersia perrieri LPERR04G16190 I 0.000
LPERR10G11580 Leersia perrieri LPERR10G11580 I 0.000
Lus10010361.g Linum usitatissimum Lus10010361.g I 0.000
Lus10036496.g Linum usitatissimum Lus10036496.g I 0.000
LjSGA_107961.1 Lotus japonicus LjSGA_107961.1 I 0.000
ENSMMUP00000034886 Macaca fascicularis ENSMMUP00000034886 N 0.000
MDP0000124879 Malus domestica MDP0000124879 I 0.000
MDP0000171878 Malus domestica MDP0000171878 I 0.000
MDP0000192940 Malus domestica MDP0000192940 I 0.000
MDP0000291729 Malus domestica MDP0000291729 I 0.000
MDP0000298333 Malus domestica MDP0000298333 I 0.000
cassava13963.valid.m1 Manihot esculenta cassava13963.valid.m1 I 0.000
cassava17722.valid.m1 Manihot esculenta cassava17722.valid.m1 I 0.000
cassava30083.valid.m1 Manihot esculenta cassava30083.valid.m1 I 0.000
cassava43469.valid.m1 Manihot esculenta cassava43469.valid.m1 I 0.000
MTR_4g025900 Medicago truncatula MTR_4g025900 I 0.000
MTR_4g101660 Medicago truncatula MTR_4g101660 I 0.000
MTR_8g018100 Medicago truncatula MTR_8g018100 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
EuGene.0000010567 Micromonas pusilla EuGene.0000010567 N 0.000
EuGene.0000050349 Micromonas pusilla EuGene.0000050349 I 0.000
est_cluster_kg.Chr_07__66__3199198:1 Micromonas sp RCC299 est_cluster_kg.Chr_07__66__3199198:1 N 0.000
mgf003166m Mimulus guttatus mgf003166m I 0.000
mgf011463m Mimulus guttatus mgf011463m I 0.000
mgf012563m Mimulus guttatus mgf012563m I 0.000
mgf015806m Mimulus guttatus mgf015806m I 0.000
Moror_16065 Moniliophthora roreri Moror_16065 I 0.000
GSMUA_Achr11G03800_001 Musa acuminata GSMUA_Achr11G03800_001 I 0.000
GSMUA_Achr11G17520_001 Musa acuminata GSMUA_Achr11G17520_001 I 0.000
GSMUA_Achr7G07130_001 Musa acuminata GSMUA_Achr7G07130_001 I 0.000
GSMUA_Achr8G11580_001 Musa acuminata GSMUA_Achr8G11580_001 I 0.000
Ocbimv22010533m.g Octopus bimaculoides Ocbimv22010533m.g N 0.000
OBART02G25670 Oryza barthii OBART02G25670 I 0.000
OBART04G20010 Oryza barthii OBART04G20010 I 0.000
OBART10G15260 Oryza barthii OBART10G15260 I 0.000
OB02G33040 Oryza brachyantha OB02G33040 I 0.000
OB04G27010 Oryza brachyantha OB04G27010 I 0.000
ORGLA02G0220100 Oryza glaberrima ORGLA02G0220100 I 0.000
ORGLA04G0171000 Oryza glaberrima ORGLA04G0171000 I 0.000
OGLUM02G26190 Oryza glumaepatula OGLUM02G26190 I 0.000
OGLUM04G19890 Oryza glumaepatula OGLUM04G19890 I 0.000
OGLUM10G15140 Oryza glumaepatula OGLUM10G15140 I 0.000
BGIOSGA014650 Oryza indica BGIOSGA014650 I 0.000
OLONG_018621 Oryza longistaminata OLONG_018621 I 0.000
OMERI02G25190 Oryza meridionalis OMERI02G25190 I 0.000
OMERI04G17000 Oryza meridionalis OMERI04G17000 I 0.000
OMERI10G11950 Oryza meridionalis OMERI10G11950 I 0.000
ONIVA02G28110 Oryza nivara ONIVA02G28110 I 0.000
ONIVA04G18220 Oryza nivara ONIVA04G18220 I 0.000
ONIVA04G21490 Oryza nivara ONIVA04G21490 I 0.000
OPUNC02G23520 Oryza punctata OPUNC02G23520 I 0.000
OPUNC10G13730 Oryza punctata OPUNC10G13730 I 0.000
ORUFI02G27080 Oryza rufipogon ORUFI02G27080 I 0.000
ORUFI04G21570 Oryza rufipogon ORUFI04G21570 I 0.000
ORUFI10G16240 Oryza rufipogon ORUFI10G16240 I 0.000
OS02G0258250 Oryza sativa OS02G0258250 N 0.000
YAB4 Oryza sativa OS02G0643200 I 0.000
YAB5 Oryza sativa OS04G0536300 I 0.000
YAB3 Oryza sativa OS10G0508300 I 0.000
Pavir.Aa01223 Panicum virgatum Pavir.Aa01223 I 0.000
Pavir.Ab02534 Panicum virgatum Pavir.Ab02534 I 0.000
Pavir.Ga00891 Panicum virgatum Pavir.Ga00891 I 0.000
Pavir.Gb00743 Panicum virgatum Pavir.Gb00743 I 0.000
Pavir.Ib03707 Panicum virgatum Pavir.Ib03707 I 0.000
PEQ_0000212901 Parascaris equorum PEQ_0000212901 N 0.000
PEQ_0000291001 Parascaris equorum PEQ_0000291001 I 0.000
PHUM393920 Pediculus humanus PHUM393920 N 0.000
M404DRAFT_63984 Pisolithus tinctorius M404DRAFT_63984 I 0.000
PNEG_03347 Pneumocystis murina PNEG_03347 I 0.000
POPTR_0001s00240 Populus trichocarpa POPTR_0001s00240 I 0.000
POPTR_0002s14600 Populus trichocarpa POPTR_0002s14600 I 0.000
POPTR_0003s11230 Populus trichocarpa POPTR_0003s11230 I 0.000
POPTR_0014s06210 Populus trichocarpa POPTR_0014s06210 I 0.000
scaffold593-EXSNAP2012.5 Pristionchus exspectatus scaffold593-EXSNAP2012.5 N 0.000
PPA12247 Pristionchus pacificus PPA12247 N 0.000
Pm017846 Prunus mume Pm017846 I 0.000
Pm023555 Prunus mume Pm023555 I 0.000
PRUPE_ppa010905mg Prunus persica PRUPE_ppa010905mg I 0.000
PRUPE_ppa011209mg Prunus persica PRUPE_ppa011209mg I 0.000
28200.m000191 Ricinus communis 28200.m000191 I 0.000
30174.m008839 Ricinus communis 30174.m008839 I 0.000
23225_YPR052C Saccharomyces paradoxus 23225_YPR052C I 0.000
SapurV1A.0033s0530 Salix purpurea SapurV1A.0033s0530 I 0.000
SapurV1A.0217s0100 Salix purpurea SapurV1A.0217s0100 I 0.000
SapurV1A.0248s0170 Salix purpurea SapurV1A.0248s0170 I 0.000
SapurV1A.0634s0130 Salix purpurea SapurV1A.0634s0130 I 0.000
SapurV1A.1275s0050 Salix purpurea SapurV1A.1275s0050 I 0.000
SapurV1A.2672s0010 Salix purpurea SapurV1A.2672s0010 I 0.000
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.000
Si007288m.g Setaria italica Si007288m.g I 0.000
Si010859m.g Setaria italica Si010859m.g I 0.000
Si018146m.g Setaria italica Si018146m.g I 0.000
Si036788m.g Setaria italica Si036788m.g I 0.000
SBAD_0000070901 Soboliphyme baturini SBAD_0000070901 I 0.000
Solyc01g091010.2 Solanum lycopersicum Solyc01g091010.2 I 0.000
PGSC0003DMG400025969 Solanum tuberosum PGSC0003DMG400025969 I 0.000
TOX2 Sorex araneus ENSSARG00000001080 N 0.000
Sb01g017560 Sorghum bicolor Sb01g017560 I 0.000
Sb04g033590 Sorghum bicolor Sb04g033590 I 0.000
Sb06g023770 Sorghum bicolor Sb06g023770 I 0.000
SPU_000793 Strongylocentrotus purpuratus SPU_000793 N 0.000
ENSTGUG00000014902 Taeniopygia guttata ENSTGUG00000014902 N 0.000
TCM_005549 Theobroma cacao TCM_005549 I 0.000
TCM_016030 Theobroma cacao TCM_016030 I 0.000
TCM_018380 Theobroma cacao TCM_018380 I 0.000
D918_03887 Trichuris suis D918_03887 N 0.000
Traes_1DL_C5AF9D06A Triticum aestivum Traes_1DL_C5AF9D06A I 0.000
Traes_2AL_71DE02042 Triticum aestivum Traes_2AL_71DE02042 I 0.000
Traes_2BL_8BEA9CE1B Triticum aestivum Traes_2BL_8BEA9CE1B I 0.000
Traes_6AL_2983D4EB6 Triticum aestivum Traes_6AL_2983D4EB6 I 0.000
Traes_6BL_3F8DB6043 Triticum aestivum Traes_6BL_3F8DB6043 I 0.000
Traes_6DL_59DB06B9F Triticum aestivum Traes_6DL_59DB06B9F I 0.000
TRIUR3_27479 Triticum urartu TRIUR3_27479 I 0.000
TRIUR3_29073 Triticum urartu TRIUR3_29073 I 0.000
VIT_02s0154g00070 Vitis vinifera VIT_02s0154g00070 I 0.000
VIT_15s0048g00550 Vitis vinifera VIT_15s0048g00550 I 0.000
GRMZM2G005353 Zea mays GRMZM2G005353 I 0.000
GRMZM2G054795 Zea mays GRMZM2G054795 I 0.000
GRMZM2G074543 Zea mays GRMZM2G074543 I 0.000
GRMZM2G167824 Zea mays GRMZM2G167824 I 0.000
GRMZM2G529859 Zea mays GRMZM2G529859 I 0.000
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.000
L798_00437 Zootermopsis nevadensis L798_00437 N 0.000