CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA10G37780
(
Glycine max
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GLYMA10G37780
T118382_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA10G37780.1
C2H2 ZF
76
99
QKCNKCSREFCSPINYRRHIRVQH
GLYMA10G37780.3
C2H2 ZF
73
96
QKCNKCSREFCSPINYRRHIRVQH
Links
Other
C2H2 ZF
family TFs
Other
Glycine max
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_013_00290
Aquilegia coerulea
Aquca_013_00290
N
0.817
PK09701.1
Cannabis sativa
PK09701.1
N
0.817
evm.TU.supercontig_107.76
Carica papaya
evm.TU.supercontig_107.76
N
0.817
gene13234-v1.0-hybrid
Fragaria vesca
gene13234-v1.0-hybrid
N
0.758
GLYMA20G30061
Glycine max
GLYMA20G30061
N
0.808
Gorai.004G117900
Gossypium raimondii
Gorai.004G117900
N
0.817
Gorai.008G275600
Gossypium raimondii
Gorai.008G275600
N
0.817
LjSGA_021319.1
Lotus japonicus
LjSGA_021319.1
N
0.798
MDP0000291317
Malus domestica
MDP0000291317
N
0.758
cassava18962.valid.m1
Manihot esculenta
cassava18962.valid.m1
N
0.758
mgf002951m
Mimulus guttatus
mgf002951m
N
0.758
GSMUA_Achr1G03120_001
Musa acuminata
GSMUA_Achr1G03120_001
N
0.758
OBART09G20240
Oryza barthii
OBART09G20240
N
0.758
ORGLA09G0165100
Oryza glaberrima
ORGLA09G0165100
N
0.758
OGLUM09G20980
Oryza glumaepatula
OGLUM09G20980
N
0.758
BGIOSGA031305
Oryza indica
BGIOSGA031305
N
0.758
OLONG_005584
Oryza longistaminata
OLONG_005584
N
0.758
OMERI01G25790
Oryza meridionalis
OMERI01G25790
N
0.758
ONIVA03G00390
Oryza nivara
ONIVA03G00390
N
0.758
OPUNC09G18580
Oryza punctata
OPUNC09G18580
N
0.758
ORUFI09G21860
Oryza rufipogon
ORUFI09G21860
N
0.758
OS09G0570200
Oryza sativa
OS09G0570200
N
0.758
Pm019310
Prunus mume
Pm019310
N
0.758
PRUPE_ppa002336mg
Prunus persica
PRUPE_ppa002336mg
N
0.758
30169.m006244
Ricinus communis
30169.m006244
N
0.758
Solyc03g025440.2
Solanum lycopersicum
Solyc03g025440.2
N
0.798
PGSC0003DMG400015791
Solanum tuberosum
PGSC0003DMG400015791
N
0.798
TCM_015200
Theobroma cacao
TCM_015200
N
0.817
VIT_16s0050g00700
Vitis vinifera
VIT_16s0050g00700
N
0.815
GRMZM2G142502
Zea mays
GRMZM2G142502
N
0.758
AC234522.1_FG009
Zea mays
AC234522.1_FG009
N
0.758