GSMUA_Achr5G15450_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr5G15450_001 T118709_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.776 0.804
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.776 0.804
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.775 0.761
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.759 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P15450_001 C2H2 ZF 160 182
GSMUA_Achr5P15450_001 C2H2 ZF 211 233

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL15 Arabidopsis lyrata fgenesh2_kg.5__2235__AT3G57920.1 I
Bostr.20903s0042 Boechera stricta Bostr.20903s0042 I
Bostr.20903s0043 Boechera stricta Bostr.20903s0043 I
Bo4g109710 Brassica oleracea Bo4g109710 I
Bo6g073290 Brassica oleracea Bo6g073290 I
Bra003305 Brassica rapa Bra003305 I
Bra014599 Brassica rapa Bra014599 I
Cagra.0686s0010 Capsella grandiflora Cagra.0686s0010 I
Carubv10017540m.g Capsella rubella Carubv10017540m.g I
Thhalv10006058m.g Eutrema salsugineum Thhalv10006058m.g I
Thhalv10016816m.g Eutrema salsugineum Thhalv10016816m.g I
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I