HETIRDRAFT_248323 (Heterobasidion irregulare)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 HETIRDRAFT_248323 T119385_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCHCODRAFT_110420
M01458_2.00 		Schizophyllum commune
VCGCCACNNN
NNNGTGGCGB		 PBM
Najafabadi et al.(2015a)
pTH10238 		0.802 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETW80832 C2H2 ZF 4 26
ETW80832 C2H2 ZF 32 52

Links

Other C2H2 ZF family TFs
Other Heterobasidion irregulare TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac016 Arabidopsis lyrata fgenesh2_kg.1__3525__AT1G34180.1 I
anac017 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003048 I
anac016 Arabidopsis thaliana AT1G34180 D
Bostr.1040s0051 Boechera stricta Bostr.1040s0051 I
Bostr.1040s0050 Boechera stricta Bostr.1040s0050 I
Bo5g085430 Brassica oleracea Bo5g085430 I
Bo8g027120 Brassica oleracea Bo8g027120 I
Bo6g044390 Brassica oleracea Bo6g044390 I
Bo5g085440 Brassica oleracea Bo5g085440 I
Bra034436 Brassica rapa Bra034436 I
Bra034439 Brassica rapa Bra034439 I
Bra036744 Brassica rapa Bra036744 I
Bra028039 Brassica rapa Bra028039 I
Cagra.3375s0004 Capsella grandiflora Cagra.3375s0004 I
Cagra.3375s0006 Capsella grandiflora Cagra.3375s0006 I
Carubv10008706m.g Capsella rubella Carubv10008706m.g I
Carubv10008761m.g Capsella rubella Carubv10008761m.g I
Thhalv10007196m.g Eutrema salsugineum Thhalv10007196m.g I
Thhalv10007221m.g Eutrema salsugineum Thhalv10007221m.g I