CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Traes_2BS_DD07C2EE6
(
Triticum aestivum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Traes_2BS_DD07C2EE6
T130548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2BS_DD07C2EE6.2
C2H2 ZF
90
112
YECSVCGKVYASYQALGGHKTSH
Traes_2BS_DD07C2EE6.2
C2H2 ZF
139
161
HQCSLCHRKFPSGQALGGHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Triticum aestivum
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00137p00104280
Amborella trichopoda
AMTR_s00137p00104280
I
0.758
fgenesh1_pm.C_scaffold_1003183
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003183
I
0.757
BRADI1G22940
Brachypodium distachyon
BRADI1G22940
N
0.803
Cucsa.352740
Cucumis sativus
Cucsa.352740
I
0.762
Cucsa.219210
Cucumis sativus
Cucsa.219210
I
0.757
LPERR07G17860
Leersia perrieri
LPERR07G17860
N
0.768
chr1.LjT45O14.140.nd
Lotus japonicus
chr1.LjT45O14.140.nd
I
0.762
chr1.CM0050.50.nc
Lotus japonicus
chr1.CM0050.50.nc
I
0.762
GSMUA_Achr2G13410_001
Musa acuminata
GSMUA_Achr2G13410_001
I
0.773
GSMUA_Achr5G08730_001
Musa acuminata
GSMUA_Achr5G08730_001
I
0.772
BGIOSGA026045
Oryza indica
BGIOSGA026045
N
0.797
ONIVA07G18980
Oryza nivara
ONIVA07G18980
N
0.797
ORUFI07G21440
Oryza rufipogon
ORUFI07G21440
N
0.797
OS07G0588600
Oryza sativa
OS07G0588600
N
0.797
Pavir.J15304
Panicum virgatum
Pavir.J15304
N
0.827
Pavir.J16973
Panicum virgatum
Pavir.J16973
N
0.827
29661.m000908
Ricinus communis
29661.m000908
I
0.758
Sb02g038000
Sorghum bicolor
Sb02g038000
N
0.827
GRMZM2G455889
Zea mays
GRMZM2G455889
I
0.761
GRMZM2G089557
Zea mays
GRMZM2G089557
N
0.797