CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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klu-1
(
Caenorhabditis elegans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00013970
T131613_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klu-1
M00637_2.00
Caenorhabditis elegans
CDCCCMCV
BGKGGGHG
PBM
Narasimhan et al.(2015)
pTH9355
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00637_2.00
C2H2 ZF
51
74
YPCTLCGQAFAVHDRLAKHIASRH
M00637_2.00
C2H2 ZF
88
110
HKCNMCSKSFSRSDMLTRHMRLH
M00637_2.00
C2H2 ZF
116
138
YSCPTCNQVFSRSDHLSTHLRTH
M00637_2.00
C2H2 ZF
144
166
YACPMCNYSASRRDMISRHMRTH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZK337.2
C2H2 ZF
332
355
YPCTLCGQAFAVHDRLAKHIASRH
ZK337.2
C2H2 ZF
369
391
HKCNMCSKSFSRSDMLTRHMRLH
ZK337.2
C2H2 ZF
397
419
YSCPTCNQVFSRSDHLSTHLRTH
ZK337.2
C2H2 ZF
425
447
YACPMCNYSASRRDMISRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis elegans
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g02699
Acanthocheilonema viteae
nAv.1.0.1.g02699
I
0.764
ACYPI004750
Acyrthosiphon pisum
ACYPI004750
I
AAEL013544
Aedes aegypti
AAEL013544
I
ANCCAN_10701
Ancylostoma caninum
ANCCAN_10701
I
0.775
AATE009348
Anopheles atroparvus
AATE009348
I
ACOM026725
Anopheles coluzzii
ACOM026725
I
ACUA004708
Anopheles culicifacies
ACUA004708
I
ADAC007677
Anopheles darlingi
ADAC007677
I
AFAF007233
Anopheles farauti
AFAF007233
I
AFUN008770
Anopheles funestus
AFUN008770
I
AGAP009899
Anopheles gambiae
AGAP009899
I
AMAM001551
Anopheles maculatus
AMAM001551
I
AMEC014989
Anopheles melas
AMEC014989
I
AMEM009101
Anopheles merus
AMEM009101
I
AMIN006836
Anopheles minimus
AMIN006836
I
ASIS008116
Anopheles sinensis
ASIS008116
I
GB42180
Apis mellifera
GB42180
I
ASU_11043
Ascaris suum
ASU_11043
I
0.761
ACEP27848
Atta cephalotes
ACEP27848
I
Bm9026
Brugia malayi
Bm9026
I
0.764
BXY_0483000
Bursaphelenchus xylophilus
BXY_0483000
I
0.773
CLEC001135
Cimex lectularius
CLEC001135
I
CGOC_0000202301
Cylicostephanus goldi
CGOC_0000202301
I
0.775
YQE_09824
Dendroctonus ponderosae
YQE_09824
I
nDi.2.2.2.g07689
Dirofilaria immitis
nDi.2.2.2.g07689
I
0.764
GF23812
Drosophila ananassae
FBgn0100806
I
GG13951
Drosophila erecta
FBgn0106213
I
GH16578
Drosophila grimshawi
FBgn0124049
I
klu
Drosophila melanogaster
FBgn0013469
D
GI13870
Drosophila mojavensis
FBgn0136624
I
GL15747
Drosophila persimilis
FBgn0153351
I
GA23784
Drosophila pseudoobscura
FBgn0245183
I
GM24789
Drosophila sechellia
FBgn0179651
I
GD12837
Drosophila simulans
FBgn0184562
I
GJ11729
Drosophila virilis
FBgn0198983
I
GK18880
Drosophila willistoni
FBgn0220878
I
GE20250
Drosophila yakuba
FBgn0237569
I
EEL_0000130601
Elaeophora elaphi
EEL_0000130601
I
0.764
GPLIN_001505900
Globodera pallida
GPLIN_001505900
I
HCOI02146900
Haemonchus contortus
HCOI02146900
I
0.773
HHAL008432-PA
Halyomorpha halys
HHAL008432-PA
I
ISCW010362
Ixodes scapularis
ISCW010362
I
LDEC006538
Leptinotarsa decemlineata
LDEC006538
I
nLs.2.1.2.g02913
Litomosoides sigmodontis
nLs.2.1.2.g02913
I
0.761
LOAG_17546
Loa loa
LOAG_17546
I
0.764
LCUP004097
Lucilia cuprina
LCUP004097
I
MhA1_Contig3096.frz3.gene1
Meloidogyne hapla
MhA1_Contig3096.frz3.gene1
I
0.761
MhA1_Contig1668.frz3.gene4
Meloidogyne hapla
MhA1_Contig1668.frz3.gene4
I
0.761
MDOA010298
Musca domestica
MDOA010298
I
WBGene00248644
Onchocerca volvulus
WBGene00248644
I
0.764
PTRK_0001586500
Parastrongyloides trichosuri
PTRK_0001586500
I
PTRK_0000952000
Parastrongyloides trichosuri
PTRK_0000952000
I
PHUM540640
Pediculus humanus
PHUM540640
I
PPAI001591
Phlebotomus papatasi
PPAI001591
I
scaffold108-EXSNAP2012.21
Pristionchus exspectatus
scaffold108-EXSNAP2012.21
I
PPA26808
Pristionchus pacificus
PPA26808
I
RPRC001140
Rhodnius prolixus
RPRC001140
I
SINV25082
Solenopsis invicta
SINV25082
I
L596_g19227
Steinernema carpocapsae
L596_g19227
I
0.761
L898_g5287
Steinernema monticolum
L898_g5287
I
0.761
L892_g30369
Steinernema scapterisci
L892_g30369
I
0.761
SMAR002322
Strigamia maritima
SMAR002322
I
SPAL_0000289400
Strongyloides papillosus
SPAL_0000289400
I
0.756
SVE_1611300
Strongyloides venezuelensis
SVE_1611300
I
0.756
TC002783
Tribolium castaneum
TC002783
I
L798_04121
Zootermopsis nevadensis
L798_04121
I