HCOI02146900 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI02146900 T153882_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu
M03680_2.00 		Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD		 SELEX
Nitta et al.(2015)
klu_1 		0.777 0.793
klu
M03681_2.00 		Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR		 SELEX
Nitta et al.(2015)
klu_2 		0.777 0.793
klu
M06114_2.00 		Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK		 B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469 		0.777 0.793
klu
M06115_2.00 		Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN		 B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469 		0.777 0.793
klu-1
M00637_2.00 		Caenorhabditis elegans
CDCCCMCV
BGKGGGHG		 PBM
Narasimhan et al.(2015)
pTH9355 		0.773 0.793
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI02146900.t1 C2H2 ZF 443 466
HCOI02146900.t1 C2H2 ZF 483 505
HCOI02146900.t1 C2H2 ZF 511 533
HCOI02146900.t1 C2H2 ZF 539 561
HCOI02146900.t2 C2H2 ZF 433 456
HCOI02146900.t2 C2H2 ZF 473 495
HCOI02146900.t2 C2H2 ZF 501 523
HCOI02146900.t2 C2H2 ZF 529 551

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_10701 Ancylostoma caninum ANCCAN_10701 I 0.825
CGOC_0000202301 Cylicostephanus goldi CGOC_0000202301 I 0.825
L596_g19227 Steinernema carpocapsae L596_g19227 I 0.804
L892_g30369 Steinernema scapterisci L892_g30369 I 0.804
L898_g5287 Steinernema monticolum L898_g5287 I 0.804
Bm9026 Brugia malayi Bm9026 I 0.801
WBGene00248644 Onchocerca volvulus WBGene00248644 I 0.801
EEL_0000130601 Elaeophora elaphi EEL_0000130601 I 0.801
nAv.1.0.1.g02699 Acanthocheilonema viteae nAv.1.0.1.g02699 I 0.801
nDi.2.2.2.g07689 Dirofilaria immitis nDi.2.2.2.g07689 I 0.801
LOAG_17546 Loa loa LOAG_17546 I 0.798
nLs.2.1.2.g02913 Litomosoides sigmodontis nLs.2.1.2.g02913 I 0.798
GPLIN_001505900 Globodera pallida GPLIN_001505900 I 0.797
ASU_11043 Ascaris suum ASU_11043 I 0.795
BXY_0483000 Bursaphelenchus xylophilus BXY_0483000 I 0.791
PPA26808 Pristionchus pacificus PPA26808 I 0.790
scaffold108-EXSNAP2012.21 Pristionchus exspectatus scaffold108-EXSNAP2012.21 I 0.790
PTRK_0000952000 Parastrongyloides trichosuri PTRK_0000952000 I 0.788
PTRK_0001586500 Parastrongyloides trichosuri PTRK_0001586500 I 0.788
SPAL_0000289400 Strongyloides papillosus SPAL_0000289400 I 0.788
SVE_1611300 Strongyloides venezuelensis SVE_1611300 I 0.788
MhA1_Contig1668.frz3.gene4 Meloidogyne hapla MhA1_Contig1668.frz3.gene4 I 0.785
MhA1_Contig3096.frz3.gene1 Meloidogyne hapla MhA1_Contig3096.frz3.gene1 I 0.785
klu Drosophila melanogaster FBgn0013469 D 0.777
GF23812 Drosophila ananassae FBgn0100806 I 0.777
GG13951 Drosophila erecta FBgn0106213 I 0.777
GH16578 Drosophila grimshawi FBgn0124049 I 0.777
GI13870 Drosophila mojavensis FBgn0136624 I 0.777
GL15747 Drosophila persimilis FBgn0153351 I 0.777
GM24789 Drosophila sechellia FBgn0179651 I 0.777
GD12837 Drosophila simulans FBgn0184562 I 0.777
GJ11729 Drosophila virilis FBgn0198983 I 0.777
GK18880 Drosophila willistoni FBgn0220878 I 0.777
GE20250 Drosophila yakuba FBgn0237569 I 0.777
GA23784 Drosophila pseudoobscura FBgn0245183 I 0.777
CBN12312 Caenorhabditis brenneri CBN12312 I 0.776
CBN30915 Caenorhabditis brenneri CBN30915 I 0.776
CJA16091 Caenorhabditis japonica CJA16091 I 0.776
CRE13956 Caenorhabditis remanei CRE13956 I 0.776
ISCW010362 Ixodes scapularis ISCW010362 I 0.776
ACYPI004750 Acyrthosiphon pisum ACYPI004750 I 0.774
GB42180 Apis mellifera GB42180 I 0.774
PHUM540640 Pediculus humanus PHUM540640 I 0.774
RPRC001140 Rhodnius prolixus RPRC001140 I 0.774
SMAR002322 Strigamia maritima SMAR002322 I 0.774
TC002783 Tribolium castaneum TC002783 I 0.774
YQE_09824 Dendroctonus ponderosae YQE_09824 I 0.774
CLEC001135 Cimex lectularius CLEC001135 I 0.774
HHAL008432-PA Halyomorpha halys HHAL008432-PA I 0.774
LCUP004097 Lucilia cuprina LCUP004097 I 0.774
LDEC006538 Leptinotarsa decemlineata LDEC006538 I 0.774
MDOA010298 Musca domestica MDOA010298 I 0.774
PPAI001591 Phlebotomus papatasi PPAI001591 I 0.774
CBG19812 Caenorhabditis briggsae CBG19812 I 0.773
klu-1 Caenorhabditis elegans WBGene00013970 D 0.773
L798_04121 Zootermopsis nevadensis L798_04121 I 0.771
ACEP27848 Atta cephalotes ACEP27848 I 0.769
NV17203 Nasonia vitripennis NV17203 I 0.769
SINV25082 Solenopsis invicta SINV25082 I 0.769
BGIBMGA002090 Bombyx mori BGIBMGA002090 N 0.766
KGM_08766 Danaus plexippus KGM_08766 N 0.763
MCINX011334 Melitaea cinxia MCINX011334 N 0.763
HMEL007277 Heliconius melpomene HMEL007277 N 0.761
AAEL013544 Aedes aegypti AAEL013544 I 0.759
ADAC007677 Anopheles darlingi ADAC007677 I 0.759
AGAP009899 Anopheles gambiae AGAP009899 I 0.759
AATE009348 Anopheles atroparvus AATE009348 I 0.759
ACOM026725 Anopheles coluzzii ACOM026725 I 0.759
ACUA004708 Anopheles culicifacies ACUA004708 I 0.759
AFAF007233 Anopheles farauti AFAF007233 I 0.759
AFUN008770 Anopheles funestus AFUN008770 I 0.759
AMAM001551 Anopheles maculatus AMAM001551 I 0.759
AMEC014989 Anopheles melas AMEC014989 I 0.759
AMEM009101 Anopheles merus AMEM009101 I 0.759
AMIN006836 Anopheles minimus AMIN006836 I 0.759
ASIS008116 Anopheles sinensis ASIS008116 I 0.759