PPA26808 (Pristionchus pacificus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PPA26808 T127120_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu
M03680_2.00 		Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD		 SELEX
Nitta et al.(2015)
klu_1 		0.771 0.783
klu
M03681_2.00 		Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR		 SELEX
Nitta et al.(2015)
klu_2 		0.771 0.783
klu
M06114_2.00 		Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK		 B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469 		0.771 0.783
klu
M06115_2.00 		Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN		 B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469 		0.771 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA26808 C2H2 ZF 421 444
PPA26808 C2H2 ZF 458 480
PPA26808 C2H2 ZF 486 508
PPA26808 C2H2 ZF 514 536

Links

Other C2H2 ZF family TFs
Other Pristionchus pacificus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold108-EXSNAP2012.21 Pristionchus exspectatus scaffold108-EXSNAP2012.21 I 0.827
GPLIN_001505900 Globodera pallida GPLIN_001505900 I 0.800
ANCCAN_10701 Ancylostoma caninum ANCCAN_10701 I 0.790
CGOC_0000202301 Cylicostephanus goldi CGOC_0000202301 I 0.790
HCOI02146900 Haemonchus contortus HCOI02146900 I 0.790
Bm9026 Brugia malayi Bm9026 I 0.787
LOAG_17546 Loa loa LOAG_17546 I 0.787
WBGene00248644 Onchocerca volvulus WBGene00248644 I 0.787
ASU_11043 Ascaris suum ASU_11043 I 0.787
EEL_0000130601 Elaeophora elaphi EEL_0000130601 I 0.787
L596_g19227 Steinernema carpocapsae L596_g19227 I 0.787
L892_g30369 Steinernema scapterisci L892_g30369 I 0.787
L898_g5287 Steinernema monticolum L898_g5287 I 0.787
nAv.1.0.1.g02699 Acanthocheilonema viteae nAv.1.0.1.g02699 I 0.787
nDi.2.2.2.g07689 Dirofilaria immitis nDi.2.2.2.g07689 I 0.787
nLs.2.1.2.g02913 Litomosoides sigmodontis nLs.2.1.2.g02913 I 0.787
L798_04121 Zootermopsis nevadensis L798_04121 I 0.777
MhA1_Contig1668.frz3.gene4 Meloidogyne hapla MhA1_Contig1668.frz3.gene4 I 0.776
MhA1_Contig3096.frz3.gene1 Meloidogyne hapla MhA1_Contig3096.frz3.gene1 I 0.776
ISCW010362 Ixodes scapularis ISCW010362 I 0.773
ACYPI004750 Acyrthosiphon pisum ACYPI004750 I 0.771
klu Drosophila melanogaster FBgn0013469 D 0.771
GF23812 Drosophila ananassae FBgn0100806 I 0.771
GG13951 Drosophila erecta FBgn0106213 I 0.771
GH16578 Drosophila grimshawi FBgn0124049 I 0.771
GI13870 Drosophila mojavensis FBgn0136624 I 0.771
GL15747 Drosophila persimilis FBgn0153351 I 0.771
GM24789 Drosophila sechellia FBgn0179651 I 0.771
GD12837 Drosophila simulans FBgn0184562 I 0.771
GJ11729 Drosophila virilis FBgn0198983 I 0.771
GK18880 Drosophila willistoni FBgn0220878 I 0.771
GE20250 Drosophila yakuba FBgn0237569 I 0.771
GA23784 Drosophila pseudoobscura FBgn0245183 I 0.771
GB42180 Apis mellifera GB42180 I 0.771
PHUM540640 Pediculus humanus PHUM540640 I 0.771
RPRC001140 Rhodnius prolixus RPRC001140 I 0.771
SMAR002322 Strigamia maritima SMAR002322 I 0.771
TC002783 Tribolium castaneum TC002783 I 0.771
YQE_09824 Dendroctonus ponderosae YQE_09824 I 0.771
CLEC001135 Cimex lectularius CLEC001135 I 0.771
HHAL008432-PA Halyomorpha halys HHAL008432-PA I 0.771
LCUP004097 Lucilia cuprina LCUP004097 I 0.771
LDEC006538 Leptinotarsa decemlineata LDEC006538 I 0.771
MDOA010298 Musca domestica MDOA010298 I 0.771
PPAI001591 Phlebotomus papatasi PPAI001591 I 0.771
PTRK_0000952000 Parastrongyloides trichosuri PTRK_0000952000 I 0.769
PTRK_0001586500 Parastrongyloides trichosuri PTRK_0001586500 I 0.769
SPAL_0000289400 Strongyloides papillosus SPAL_0000289400 I 0.769
SVE_1611300 Strongyloides venezuelensis SVE_1611300 I 0.769
ACEP27848 Atta cephalotes ACEP27848 I 0.766
NV17203 Nasonia vitripennis NV17203 I 0.766
SINV25082 Solenopsis invicta SINV25082 I 0.766
BXY_0483000 Bursaphelenchus xylophilus BXY_0483000 I 0.764