CBG19812 (Caenorhabditis briggsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBG19812 T082949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-1
M00637_2.00 		Caenorhabditis elegans
CDCCCMCV
BGKGGGHG		 PBM
Narasimhan et al.(2015)
pTH9355 		0.821 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG19812 C2H2 ZF 305 328
CBG19812 C2H2 ZF 342 364
CBG19812 C2H2 ZF 370 392
CBG19812 C2H2 ZF 398 420

Links

Other C2H2 ZF family TFs
Other Caenorhabditis briggsae TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE13956 Caenorhabditis remanei CRE13956 I 0.824
CBN12312 Caenorhabditis brenneri CBN12312 I 0.821
CBN30915 Caenorhabditis brenneri CBN30915 I 0.821
klu-1 Caenorhabditis elegans WBGene00013970 D 0.821
CJA16091 Caenorhabditis japonica CJA16091 I 0.809
ANCCAN_10701 Ancylostoma caninum ANCCAN_10701 I 0.775
CGOC_0000202301 Cylicostephanus goldi CGOC_0000202301 I 0.775
BXY_0483000 Bursaphelenchus xylophilus BXY_0483000 I 0.773
HCOI02146900 Haemonchus contortus HCOI02146900 I 0.773
Bm9026 Brugia malayi Bm9026 I 0.764
LOAG_17546 Loa loa LOAG_17546 I 0.764
WBGene00248644 Onchocerca volvulus WBGene00248644 I 0.764
EEL_0000130601 Elaeophora elaphi EEL_0000130601 I 0.764
nAv.1.0.1.g02699 Acanthocheilonema viteae nAv.1.0.1.g02699 I 0.764
nDi.2.2.2.g07689 Dirofilaria immitis nDi.2.2.2.g07689 I 0.764
ASU_11043 Ascaris suum ASU_11043 I 0.761
L596_g19227 Steinernema carpocapsae L596_g19227 I 0.761
L892_g30369 Steinernema scapterisci L892_g30369 I 0.761
L898_g5287 Steinernema monticolum L898_g5287 I 0.761
MhA1_Contig1668.frz3.gene4 Meloidogyne hapla MhA1_Contig1668.frz3.gene4 I 0.761
MhA1_Contig3096.frz3.gene1 Meloidogyne hapla MhA1_Contig3096.frz3.gene1 I 0.761
nLs.2.1.2.g02913 Litomosoides sigmodontis nLs.2.1.2.g02913 I 0.761
SPAL_0000289400 Strongyloides papillosus SPAL_0000289400 I 0.756
SVE_1611300 Strongyloides venezuelensis SVE_1611300 I 0.756