CBN30915 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN30915 T083094_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-1
M00637_2.00 		Caenorhabditis elegans
CDCCCMCV
BGKGGGHG		 PBM
Narasimhan et al.(2015)
pTH9355 		0.824 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN30915 C2H2 ZF 314 337
CBN30915 C2H2 ZF 351 373
CBN30915 C2H2 ZF 379 401
CBN30915 C2H2 ZF 407 429

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN12312 Caenorhabditis brenneri CBN12312 I 0.827
CRE13956 Caenorhabditis remanei CRE13956 I 0.824
klu-1 Caenorhabditis elegans WBGene00013970 D 0.824
CBG19812 Caenorhabditis briggsae CBG19812 I 0.821
CJA16091 Caenorhabditis japonica CJA16091 I 0.815
ANCCAN_10701 Ancylostoma caninum ANCCAN_10701 I 0.778
CGOC_0000202301 Cylicostephanus goldi CGOC_0000202301 I 0.778
HCOI02146900 Haemonchus contortus HCOI02146900 I 0.776
BXY_0483000 Bursaphelenchus xylophilus BXY_0483000 I 0.773
Bm9026 Brugia malayi Bm9026 I 0.764
LOAG_17546 Loa loa LOAG_17546 I 0.764
WBGene00248644 Onchocerca volvulus WBGene00248644 I 0.764
EEL_0000130601 Elaeophora elaphi EEL_0000130601 I 0.764
nAv.1.0.1.g02699 Acanthocheilonema viteae nAv.1.0.1.g02699 I 0.764
nDi.2.2.2.g07689 Dirofilaria immitis nDi.2.2.2.g07689 I 0.764
ASU_11043 Ascaris suum ASU_11043 I 0.761
L596_g19227 Steinernema carpocapsae L596_g19227 I 0.761
L892_g30369 Steinernema scapterisci L892_g30369 I 0.761
L898_g5287 Steinernema monticolum L898_g5287 I 0.761
MhA1_Contig1668.frz3.gene4 Meloidogyne hapla MhA1_Contig1668.frz3.gene4 I 0.761
MhA1_Contig3096.frz3.gene1 Meloidogyne hapla MhA1_Contig3096.frz3.gene1 I 0.761
nLs.2.1.2.g02913 Litomosoides sigmodontis nLs.2.1.2.g02913 I 0.761
GPLIN_001505900 Globodera pallida GPLIN_001505900 I 0.757
SPAL_0000289400 Strongyloides papillosus SPAL_0000289400 I 0.756
SVE_1611300 Strongyloides venezuelensis SVE_1611300 I 0.756