SapurV1A.0052s0050 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.0052s0050 T143454_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP5
M01851_2.00 		Arabidopsis thaliana
DSWTNNNN
NNNNAWSH		 PBM
Weirauch et al.(2014)
pTH7539 		0.803 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0052s0050.1.p C2H2 ZF 46 68

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GIS2 Arabidopsis lyrata fgenesh2_kg.6__609__AT5G06650.1 I 0.764
fgenesh2_kg.6__2677__AT5G27880.1 Arabidopsis lyrata fgenesh2_kg.6__2677__AT5G27880.1 N 0.774
GIS2 Arabidopsis thaliana AT5G06650 I 0.764
ZFP5 Arabidopsis thaliana AT1G10480 D 0.803
Bostr.29827s0107 Boechera stricta Bostr.29827s0107 N 0.774
Bostr.13671s0437 Boechera stricta Bostr.13671s0437 I 0.803
Bostr.13129s0308 Boechera stricta Bostr.13129s0308 I 0.764
Bo8g109510 Brassica oleracea Bo8g109510 I 0.803
Bo2g155500 Brassica oleracea Bo2g155500 N 0.774
Bo2g007320 Brassica oleracea Bo2g007320 I 0.764
Bra020571 Brassica rapa Bra020571 N 0.774
Bra028724 Brassica rapa Bra028724 I 0.764
PK10012.1 Cannabis sativa PK10012.1 I 0.757
Carubv10018785m.g Capsella rubella Carubv10018785m.g I 0.812
Carubv10003820m.g Capsella rubella Carubv10003820m.g I 0.764
evm.TU.supercontig_1307.1 Carica papaya evm.TU.supercontig_1307.1 I 0.812
Ca_23376 Cicer arietinum Ca_23376 N 0.764
Ca_08116 Cicer arietinum Ca_08116 I 0.762
Thhalv10008773m.g Eutrema salsugineum Thhalv10008773m.g I 0.803
gene05169-v1.0-hybrid Fragaria vesca gene05169-v1.0-hybrid I 0.767
GLYMA03G37610 Glycine max GLYMA03G37610 I 0.767
GLYMA19G40220 Glycine max GLYMA19G40220 I 0.767
Lus10017229.g Linum usitatissimum Lus10017229.g I 0.812
chr5.LjT04G07.90.nd Lotus japonicus chr5.LjT04G07.90.nd I 0.805
MDP0000166683 Malus domestica MDP0000166683 I 0.792
MDP0000165710 Malus domestica MDP0000165710 I 0.812
MDP0000121370 Malus domestica MDP0000121370 I 0.812
cassava45710.m1 Manihot esculenta cassava45710.m1 I 0.805
MTR_2g067740 Medicago truncatula MTR_2g067740 N 0.764
e_gw1.34.233.1 Physcomitrella patens e_gw1.34.233.1 I 0.814
Pm008291 Prunus mume Pm008291 I 0.815
30076.m004693 Ricinus communis 30076.m004693 I 0.827
SELMODRAFT_450817 Selaginella moellendorffii SELMODRAFT_450817 I 0.792
SELMODRAFT_450828 Selaginella moellendorffii SELMODRAFT_450828 I 0.792
SELMODRAFT_450830 Selaginella moellendorffii SELMODRAFT_450830 I 0.792
Solyc10g078990.1 Solanum lycopersicum Solyc10g078990.1 I 0.812
Solyc10g078970.1 Solanum lycopersicum Solyc10g078970.1 I 0.802
PGSC0003DMG400011450 Solanum tuberosum PGSC0003DMG400011450 I 0.812
TRIUR3_34498 Triticum urartu TRIUR3_34498 I 0.757
GRMZM2G703281 Zea mays GRMZM2G703281 I 0.812