CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.2.501.1
(
Phytophthora capsici
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw1.2.501.1
T146128_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.2.501.1
C2H2 ZF
20
44
HACPQPGCTRRFNRKYTLAEHIKTH
e_gw1.2.501.1
C2H2 ZF
50
74
HVCPVRTCGKRFSTSGNLSRHKRLH
e_gw1.2.501.1
C2H2 ZF
80
104
LKCPVQGCICTFPSNNKLEKHMKFH
e_gw1.2.501.1
C2H2 ZF
111
135
VCLVPGCGKTFSTTGNLNRHLKHQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora capsici
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.34.40.1
Phytophthora capsici
e_gw1.34.40.1
N
0.791
fgenesh_scip_prom.46568.6498
Phytophthora kernoviae
fgenesh_scip_prom.46568.6498
N
0.766
fgenesh_scip_prom.46568.9633
Phytophthora kernoviae
fgenesh_scip_prom.46568.9633
N
0.785
fgenesh_scip_prom.28083.660
Phytophthora lateralis
fgenesh_scip_prom.28083.660
N
0.785
fgenesh_scip_prom.28083.9722
Phytophthora lateralis
fgenesh_scip_prom.28083.9722
N
0.796
fgenesh_scip_prom.28083.9723
Phytophthora lateralis
fgenesh_scip_prom.28083.9723
N
0.773
F443_10163
Phytophthora parasitica
F443_10163
N
0.783
F443_10160
Phytophthora parasitica
F443_10160
N
0.827
Phyra76421
Phytophthora ramorum
Phyra76421
N
0.796
Phyra76423
Phytophthora ramorum
Phyra76423
N
0.782
Physo128919
Phytophthora sojae
Physo128919
N
0.801
maker-pir_contig_2201-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_2201-fgenesh-gene-0.0
N
0.758
maker-piw_contig_2080-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_2080-fgenesh-gene-0.0
N
0.760
maker-piw_contig_2080-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_2080-fgenesh-gene-0.2
N
0.763
PYU1_G008748
Pythium ultimum
PYU1_G008748
N
0.779
PYU1_G008749
Pythium ultimum
PYU1_G008749
N
0.771
PYU1_G008755
Pythium ultimum
PYU1_G008755
N
0.758
snap_masked-pve_contig_11-abinit-gene-0.108
Pythium vexans
snap_masked-pve_contig_11-abinit-gene-0.108
N
0.765