CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra76421
(
Phytophthora ramorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Phyra76421
T126276_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra76421
C2H2 ZF
35
59
YRCTQAGCHREFNRKYTLAEHIKTH
Phyra76421
C2H2 ZF
65
89
HLCPVPTCGKRFSTSGNLSRHKRLH
Phyra76421
C2H2 ZF
95
119
LKCPVDGCICTFPSNNKLEKHMKFH
Phyra76421
C2H2 ZF
126
150
VCLVPGCGKTFSTTGNLNRHLKNHH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora ramorum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.9722
Phytophthora lateralis
fgenesh_scip_prom.28083.9722
N
0.827
Physo128919
Phytophthora sojae
Physo128919
N
0.808
F443_10160
Phytophthora parasitica
F443_10160
N
0.796
e_gw1.2.501.1
Phytophthora capsici
e_gw1.2.501.1
N
0.796
F443_10163
Phytophthora parasitica
F443_10163
N
0.779
Phyra76423
Phytophthora ramorum
Phyra76423
N
0.779
PYU1_G008748
Pythium ultimum
PYU1_G008748
N
0.779
fgenesh_scip_prom.28083.660
Phytophthora lateralis
fgenesh_scip_prom.28083.660
N
0.771
fgenesh_scip_prom.46568.9633
Phytophthora kernoviae
fgenesh_scip_prom.46568.9633
N
0.771
e_gw1.34.40.1
Phytophthora capsici
e_gw1.34.40.1
N
0.771
F443_10165
Phytophthora parasitica
F443_10165
N
0.769
PYU1_G008749
Pythium ultimum
PYU1_G008749
N
0.768
PITG_01305
Phytophthora infestans
PITG_01305
N
0.767
fgenesh_scip_prom.46568.6498
Phytophthora kernoviae
fgenesh_scip_prom.46568.6498
N
0.761