CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F443_10160
(
Phytophthora parasitica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
F443_10160
T114260_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI45183
C2H2 ZF
36
60
HACPEPGCTRRFNRKYTLAEHIKTH
ETI45183
C2H2 ZF
66
90
HVCPVRTCGKRFSTSGNLSRHKRLH
ETI45183
C2H2 ZF
96
120
LKCPVQGCICTFPSNNKLEKHMKFH
ETI45183
C2H2 ZF
127
151
VCLVPGCGKTFSTTGNLNRHLKHQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora parasitica
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.2.501.1
Phytophthora capsici
e_gw1.2.501.1
N
0.827
Physo128919
Phytophthora sojae
Physo128919
N
0.801
fgenesh_scip_prom.28083.9722
Phytophthora lateralis
fgenesh_scip_prom.28083.9722
N
0.796
Phyra76421
Phytophthora ramorum
Phyra76421
N
0.796
e_gw1.34.40.1
Phytophthora capsici
e_gw1.34.40.1
N
0.791
fgenesh_scip_prom.28083.660
Phytophthora lateralis
fgenesh_scip_prom.28083.660
N
0.785
fgenesh_scip_prom.46568.9633
Phytophthora kernoviae
fgenesh_scip_prom.46568.9633
N
0.785
F443_10163
Phytophthora parasitica
F443_10163
N
0.783
Phyra76423
Phytophthora ramorum
Phyra76423
N
0.782
PYU1_G008748
Pythium ultimum
PYU1_G008748
N
0.779
fgenesh_scip_prom.28083.9723
Phytophthora lateralis
fgenesh_scip_prom.28083.9723
N
0.773
PYU1_G008749
Pythium ultimum
PYU1_G008749
N
0.771
fgenesh_scip_prom.46568.6498
Phytophthora kernoviae
fgenesh_scip_prom.46568.6498
N
0.766
snap_masked-pve_contig_11-abinit-gene-0.108
Pythium vexans
snap_masked-pve_contig_11-abinit-gene-0.108
N
0.765
maker-piw_contig_2080-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_2080-fgenesh-gene-0.2
N
0.763
maker-piw_contig_2080-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_2080-fgenesh-gene-0.0
N
0.760
maker-pir_contig_2201-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_2201-fgenesh-gene-0.0
N
0.758
PYU1_G008755
Pythium ultimum
PYU1_G008755
N
0.758