HCOI02104300 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI02104300 T153878_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-29
M00613_2.00 		Caenorhabditis elegans
WTTTTTTN
NAAAAAAW		 PBM
Narasimhan et al.(2015)
pTH9930 		0.785 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI02104300.t1 C2H2 ZF 9 31
HCOI02104300.t1 C2H2 ZF 39 60
HCOI02104300.t1 C2H2 ZF 66 90
HCOI02104300.t1 C2H2 ZF 96 118
HCOI02104300.t1 C2H2 ZF 127 149

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI006067 Acyrthosiphon pisum ACYPI006067 N 0.780
ANCCEY_04897 Ancylostoma ceylanicum ANCCEY_04897 I 0.827
Bm6154 Brugia malayi Bm6154 N 0.759
CBG02753 Caenorhabditis briggsae CBG02753 I 0.785
lin-29 Caenorhabditis elegans WBGene00003015 D 0.785
CJA15666 Caenorhabditis japonica CJA15666 I 0.778
CRE02078 Caenorhabditis remanei CRE02078 I 0.785
nDi.2.2.2.g02124 Dirofilaria immitis nDi.2.2.2.g02124 N 0.759
DME_0000431501 Dracunculus medinensis DME_0000431501 N 0.759
LOAG_03289 Loa loa LOAG_03289 N 0.759
WBGene00247150 Onchocerca volvulus WBGene00247150 N 0.759
scaffold83-EXSNAP2012.3 Pristionchus exspectatus scaffold83-EXSNAP2012.3 I 0.810
scaffold942-EXSNAP2012.1 Pristionchus exspectatus scaffold942-EXSNAP2012.1 I 0.810
Ppa-lin-29 Pristionchus pacificus PPA19410 I 0.810
nRc.2.0.1.g29712 Romanomermis culicivorax nRc.2.0.1.g29712 I 0.808
TCLT_0000227601 Thelazia callipaeda TCLT_0000227601 N 0.759