CRE02078 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE02078 T084965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-29
M00613_2.00 		Caenorhabditis elegans
WTTTTTTN
NAAAAAAW		 PBM
Narasimhan et al.(2015)
pTH9930 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE02078 C2H2 ZF 165 187
CRE02078 C2H2 ZF 195 216
CRE02078 C2H2 ZF 222 246
CRE02078 C2H2 ZF 252 274
CRE02078 C2H2 ZF 283 305

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG02753 Caenorhabditis briggsae CBG02753 I 0.827
lin-29 Caenorhabditis elegans WBGene00003015 D 0.827
CJA15666 Caenorhabditis japonica CJA15666 I 0.819
ANCCEY_04897 Ancylostoma ceylanicum ANCCEY_04897 I 0.785
HCOI02104300 Haemonchus contortus HCOI02104300 I 0.785
CBN14672 Caenorhabditis brenneri CBN14672 I 0.771
CBN28055 Caenorhabditis brenneri CBN28055 I 0.771
Ppa-lin-29 Pristionchus pacificus PPA19410 I 0.768
scaffold83-EXSNAP2012.3 Pristionchus exspectatus scaffold83-EXSNAP2012.3 I 0.768
scaffold942-EXSNAP2012.1 Pristionchus exspectatus scaffold942-EXSNAP2012.1 I 0.768
nRc.2.0.1.g29712 Romanomermis culicivorax nRc.2.0.1.g29712 I 0.766