SSTP_0001164000 (Strongyloides stercoralis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SSTP_0001164000 T157375_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.768 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSTP_0001164000.1 C2H2 ZF 53 75
SSTP_0001164000.1 C2H2 ZF 81 103
SSTP_0001164000.1 C2H2 ZF 109 131

Links

Other C2H2 ZF family TFs
Other Strongyloides stercoralis TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001110701 Angiostrongylus cantonensis ACAC_0001110701 I 0.771
ACOC_0000922301 Angiostrongylus costaricensis ACOC_0000922301 I 0.771
BXY_1109100 Bursaphelenchus xylophilus BXY_1109100 N 0.776
CBN25393 Caenorhabditis brenneri CBN25393 I 0.764
CBG14093 Caenorhabditis briggsae CBG14093 I 0.768
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.768
CJA18701 Caenorhabditis japonica CJA18701 I 0.768
CRE00458 Caenorhabditis remanei CRE00458 I 0.768
DICVIV_07054 Dictyocaulus viviparus DICVIV_07054 I 0.771
DME_0000351801 Dracunculus medinensis DME_0000351801 I 0.767
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.771
HCOI00724700 Haemonchus contortus HCOI00724700 I 0.771
HCOI02146700 Haemonchus contortus HCOI02146700 I 0.771
HPLM_0001991801 Haemonchus placei HPLM_0001991801 I 0.771
HPBE_0002592101 Heligmosomoides bakeri HPBE_0002592101 I 0.771
NECAME_01009 Necator americanus NECAME_01009 I 0.771
PTRK_0001062600 Parastrongyloides trichosuri PTRK_0001062600 I 0.827
RSKR_0000546600 Rhabditophanes kr3021 RSKR_0000546600 I 0.765
RSKR_0000755800 Rhabditophanes kr3021 RSKR_0000755800 I 0.775
L596_g623 Steinernema carpocapsae L596_g623 I 0.760
SVUK_0001722901 Strongylus vulgaris SVUK_0001722901 I 0.771
SMUV_0000188601 Syphacia muris SMUV_0000188601 I 0.771
TELCIR_11883 Teladorsagia circumcincta TELCIR_11883 I 0.771