RHTO_00634 (Rhodosporidium toruloides)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 RHTO_00634 T160369_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAP2
M08452_2.00 		Saccharomyces cerevisiae
TTGGH
DCCAA		 COMPILED
Mathelier et al.(2014)
MA0313.1 		0.839 0.839
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.750 0.750
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.750 0.750
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.750 0.750
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.750 0.750
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.750 0.750
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMS22355 CBF/NF-Y 252 307

Links

Other CBF/NF-Y family TFs
Other Rhodosporidium toruloides TFs

457 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_42755 Aegilops tauschii F775_42755 N 0.000
F775_20859 Aegilops tauschii F775_20859 N 0.000
AMTR_s00057p00069720 Amborella trichopoda AMTR_s00057p00069720 N 0.000
AMTR_s00087p00039380 Amborella trichopoda AMTR_s00087p00039380 N 0.000
AMTR_s00009p00257950 Amborella trichopoda AMTR_s00009p00257950 N 0.000
MYB60 Arabidopsis thaliana AT1G08810 D 0.000
MYB3 Arabidopsis thaliana AT1G22640 D 0.000
MYB95 Arabidopsis thaliana AT1G74430 N 0.000
ATMYB16 Arabidopsis thaliana AT5G15310 I 0.000
Bostr.13129s0196 Boechera stricta Bostr.13129s0196 I 0.000
Bo8g104180 Brassica oleracea Bo8g104180 N 0.000
Bo4g198650 Brassica oleracea Bo4g198650 N 0.000
Bra024685 Brassica rapa Bra024685 N 0.000
PK00358.1 Cannabis sativa PK00358.1 N 0.000
PK21717.1 Cannabis sativa PK21717.1 N 0.000
PK22972.1 Cannabis sativa PK22972.1 N 0.000
Cagra.0876s0043 Capsella grandiflora Cagra.0876s0043 N 0.000
Cagra.5789s0001 Capsella grandiflora Cagra.5789s0001 N 0.000
evm.TU.supercontig_1.55 Carica papaya evm.TU.supercontig_1.55 N 0.000
evm.TU.supercontig_18.15 Carica papaya evm.TU.supercontig_18.15 N 0.000
evm.TU.supercontig_34.3 Carica papaya evm.TU.supercontig_34.3 N 0.000
Ca_10215 Cicer arietinum Ca_10215 N 0.000
Ciclev10023519m.g Citrus clementina Ciclev10023519m.g N 0.000
orange1.1g019307m.g Citrus sinensis orange1.1g019307m.g I 0.000
Cucsa.051050 Cucumis sativus Cucsa.051050 I 0.000
Eucgr.B03766 Eucalyptus grandis Eucgr.B03766 N 0.000
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.000
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.000
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.000
GLYMA16G16170 Glycine max GLYMA16G16170 N 0.000
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.000
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.000
Gorai.001G239000 Gossypium raimondii Gorai.001G239000 I 0.000
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I 0.000
MLOC_71332 Hordeum vulgare MLOC_71332 N 0.000
MLOC_59184 Hordeum vulgare MLOC_59184 N 0.000
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.000
MLOC_12474 Hordeum vulgare MLOC_12474 N 0.000
LjSGA_064890.1.1 Lotus japonicus LjSGA_064890.1.1 N 0.000
CM0385.220.nd Lotus japonicus CM0385.220.nd N 0.000
LjSGA_057664.1 Lotus japonicus LjSGA_057664.1 N 0.000
LjSGA_057038.1 Lotus japonicus LjSGA_057038.1 N 0.000
LjSGA_034303.1 Lotus japonicus LjSGA_034303.1 N 0.000
chr1.CM0600.120.nd Lotus japonicus chr1.CM0600.120.nd N 0.000
chr5.CM0071.390.nd Lotus japonicus chr5.CM0071.390.nd N 0.000
LjSGA_014958.1 Lotus japonicus LjSGA_014958.1 N 0.000
MDP0000158409 Malus domestica MDP0000158409 N 0.000
MDP0000793261 Malus domestica MDP0000793261 N 0.000
MDP0000825447 Malus domestica MDP0000825447 N 0.000
MDP0000879675 Malus domestica MDP0000879675 N 0.000
MDP0000911051 Malus domestica MDP0000911051 N 0.000
cassava2662.m1 Manihot esculenta cassava2662.m1 N 0.000
cassava45648.m1 Manihot esculenta cassava45648.m1 N 0.000
cassava15703.m1 Manihot esculenta cassava15703.m1 N 0.000
mgf017705m Mimulus guttatus mgf017705m N 0.000
mgf018056m Mimulus guttatus mgf018056m N 0.000
mgf020736m Mimulus guttatus mgf020736m N 0.000
mgf023771m Mimulus guttatus mgf023771m N 0.000
mg021480m Mimulus guttatus mg021480m N 0.000
OB06G28240 Oryza brachyantha OB06G28240 N 0.000
ORGLA02G0219000 Oryza glaberrima ORGLA02G0219000 N 0.000
BGIOSGA010548 Oryza indica BGIOSGA010548 N 0.000
OLONG_025203 Oryza longistaminata OLONG_025203 N 0.000
OS04G0517100 Oryza sativa OS04G0517100 N 0.000
OS05G0350900 Oryza sativa OS05G0350900 N 0.000
Pavir.J25377 Panicum virgatum Pavir.J25377 N 0.000
Pavir.J14839 Panicum virgatum Pavir.J14839 N 0.000
Pavir.Ia03786 Panicum virgatum Pavir.Ia03786 N 0.000
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.000
Pavir.Eb02286 Panicum virgatum Pavir.Eb02286 N 0.000
Pavir.Db00878 Panicum virgatum Pavir.Db00878 N 0.000
PDK_20s1546421g001 Phoenix dactylifera PDK_20s1546421g001 N 0.000
PDK_20s1922781g001 Phoenix dactylifera PDK_20s1922781g001 N 0.000
e_gw1.1.4.1 Physcomitrella patens e_gw1.1.4.1 N 0.000
POPTR_0017s10780 Populus trichocarpa POPTR_0017s10780 N 0.000
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.000
Pm015551 Prunus mume Pm015551 N 0.000
Pm000007 Prunus mume Pm000007 N 0.000
30128.m008990 Ricinus communis 30128.m008990 N 0.000
SapurV1A.0876s0040 Salix purpurea SapurV1A.0876s0040 I 0.000
SapurV1A.0890s0050 Salix purpurea SapurV1A.0890s0050 I 0.000
SapurV1A.3377s0010 Salix purpurea SapurV1A.3377s0010 I 0.000
Solyc03g098270.1 Solanum lycopersicum Solyc03g098270.1 N 0.000
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.000
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N 0.000
TCM_041010 Theobroma cacao TCM_041010 I 0.000
Traes_1BL_A44464337 Triticum aestivum Traes_1BL_A44464337 N 0.000
Traes_7AS_ADDEF000C Triticum aestivum Traes_7AS_ADDEF000C N 0.000
Traes_7AS_FD974A17F Triticum aestivum Traes_7AS_FD974A17F N 0.000
Traes_7DS_76515C538 Triticum aestivum Traes_7DS_76515C538 N 0.000
Traes_6AL_C0A2B4F041 Triticum aestivum Traes_6AL_C0A2B4F041 N 0.000
Traes_5AS_D238844BB Triticum aestivum Traes_5AS_D238844BB N 0.000
Traes_3DL_D9A29948B Triticum aestivum Traes_3DL_D9A29948B N 0.000
Traes_3AL_F09C7CA19 Triticum aestivum Traes_3AL_F09C7CA19 N 0.000
TRIUR3_33467 Triticum urartu TRIUR3_33467 N 0.000
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.000
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.000