ACOM040639 (Anopheles coluzzii)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 ACOM040639 T166363_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.855 0.855
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.855 0.855
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.771 0.771
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.771 0.771
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.771 0.771
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.771 0.771
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.771 0.771
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.771 0.771
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.771 0.771
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.771 0.771
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.771 0.771
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.771 0.771
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.771 0.771
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.771 0.771
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOM040639-PA CSL 84 215

Links

Other CSL family TFs
Other Anopheles coluzzii TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_030_00364 Aquilegia coerulea Aquca_030_00364 N
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N
PK21090.1 Cannabis sativa PK21090.1 N
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N
Ca_11130 Cicer arietinum Ca_11130 N
Cla005525 Citrullus lanatus Cla005525 N
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N
Cucsa.180010 Cucumis sativus Cucsa.180010 N
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N
GLYMA12G02530 Glycine max GLYMA12G02530 N
GLYMA11G10220 Glycine max GLYMA11G10220 N
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N
MLOC_62589 Hordeum vulgare MLOC_62589 N
LPERR07G16410 Leersia perrieri LPERR07G16410 N
LPERR11G01220 Leersia perrieri LPERR11G01220 N
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N
MDP0000289554 Malus domestica MDP0000289554 N
MDP0000287321 Malus domestica MDP0000287321 N
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N
MTR_4g076020 Medicago truncatula MTR_4g076020 N
OBART07G19080 Oryza barthii OBART07G19080 N
OB07G24850 Oryza brachyantha OB07G24850 N
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N
BGIOSGA025964 Oryza indica BGIOSGA025964 N
OMERI07G15800 Oryza meridionalis OMERI07G15800 N
ONIVA07G17430 Oryza nivara ONIVA07G17430 N
OPUNC07G18000 Oryza punctata OPUNC07G18000 N
OPUNC07G17970 Oryza punctata OPUNC07G17970 N
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N
OS07G0567700 Oryza sativa OS07G0567700 N
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N
Pm014866 Prunus mume Pm014866 N
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N
29872.m000537 Ricinus communis 29872.m000537 N
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N
Si032551m.g Setaria italica Si032551m.g N
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N
PGSC0003DMG400011742 Solanum tuberosum PGSC0003DMG400011742 N
Sb02g036680 Sorghum bicolor Sb02g036680 N
TCM_002021 Theobroma cacao TCM_002021 N
Traes_2BS_015167E00 Triticum aestivum Traes_2BS_015167E00 N
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N
GRMZM2G131516 Zea mays GRMZM2G131516 N
GRMZM2G106548 Zea mays GRMZM2G106548 N