FHY3 (Arabidopsis thaliana)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 AT3G22170 T178986_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00		 Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1		 (Direct) (Direct)
FHY3
M09540_2.00		 Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G22170.1 FAR1 84 186
AT3G22170.2 FAR1 84 186

Links

Other FAR1 family TFs
Other Arabidopsis thaliana TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AWRI1499_3090 Brettanomyces bruxellensis AWRI1499_3090 I
CLUG_00203 Candida lusitaniae CLUG_00203 I
CLUG_00203 Clavispora lusitaniae CLUG_00203 I
DEHA2F03366g Debaryomyces hansenii DEHA2F03366g I
KAFR_0F01040 Kazachstania africana KAFR_0F01040 I
KNAG_0D00690 Kazachstania naganishii KNAG_0D00690 I
PAS_FragB_0075 Komagataella pastoris PAS_FragB_0075 I
SAKL0A02860g Lachancea kluyveri SAKL0A02860g I
GNLVRS01_PISO0F02711g Millerozyma farinosa GNLVRS01_PISO0F02711g I
GNLVRS01_PISO0J02671g Millerozyma farinosa GNLVRS01_PISO0J02671g I
NCAS_0D04190 Naumovozyma castellii NCAS_0D04190 I
NCAS_0G01100 Naumovozyma castellii NCAS_0G01100 I
NDAI_0I00740 Naumovozyma dairenensis NDAI_0I00740 I
XP_002490850.1 Pichia pastoris XP_002490850.1 I
e_gwh1.5.1.177.1 Pichia stipitis e_gwh1.5.1.177.1 N
SU7_3455 Saccharomyces arboricola SU7_3455 I
24374_YPL248C Saccharomyces bayanus 24374_YPL248C I
Scas_Contig720.58 Saccharomyces castellii Scas_Contig720.58 I
GAL4 Saccharomyces cerevisiae YPL248C D
SKUD_900401 Saccharomyces kudriavzevii SKUD_900401 I
21336_YPL248C Saccharomyces mikatae 21336_YPL248C I
21920_YPL248C Saccharomyces paradoxus 21920_YPL248C I
TBLA_0G01800 Tetrapisispora blattae TBLA_0G01800 I
TPHA_0H01980 Tetrapisispora phaffii TPHA_0H01980 I
ZBAI_04658 Zygosaccharomyces bailii ZBAI_04658 I
ZBAI_06699 Zygosaccharomyces bailii ZBAI_06699 I