GLYMA20G26810 (Glycine max)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 GLYMA20G26810 T179493_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FAR1
M06880_2.00 		Arabidopsis thaliana
NNYHCACGCGCYDNH
DNHRGCGCGTGDRNN		 Dap-seq
OMalley et al.(2016)
FAR1_col_a 		0.875 0.875
FAR1
M06881_2.00 		Arabidopsis thaliana
NNNNBDNDNNYHCACGCGCYD
HRGCGCGTGDRNNHNHVNNNN		 Dap-seq
OMalley et al.(2016)
FAR1_colamp_a 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G26810.1 FAR1 48 135
GLYMA20G26810.2 FAR1 48 135

Links

Other FAR1 family TFs
Other Glycine max TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA07G12160 Glycine max GLYMA07G12160 N
GLYMA09G30050 Glycine max GLYMA09G30050 N
OMERI10G00680 Oryza meridionalis OMERI10G00680 I
C1orf35 Otolemur garnettii ENSOGAG00000010978 I
RGD1304587 Rattus norvegicus ENSRNOG00000002944 I
Traes_4BL_011308A76 Triticum aestivum Traes_4BL_011308A76 I
VIT_17s0000g01860 Vitis vinifera VIT_17s0000g01860 N